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SCNpilot_solid_1_scaffold_20_88

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(87205..87504)

Top 3 Functional Annotations

Value Algorithm Source
Flagellar protein n=2 Tax=Bordetella holmesii RepID=M5NRL0_9BORD similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 87.0
  • Bit_score: 139
  • Evalue 1.80e-30
flhB HrpN YscU SpaS family protein similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 87.0
  • Bit_score: 139
  • Evalue 4.90e-31
Putative FlhB domain protein {ECO:0000313|EMBL:KAK80249.1}; TaxID=1331212 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella holme similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 87.0
  • Bit_score: 139
  • Evalue 2.40e-30

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Taxonomy

Bordetella holmesii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGAAGTCGCGGCCGGCTGACTCCTACCGCCCCAGCGCGGTGGCCATCACTTACGATCAGGACGATCAGGCGCCGCGCGTCGTCGCCAAGGGCTACGGCAACCTGGCGGAAACCATCATCCGGACAGCGCGCGAGCACGGCCTGTACATCCATGAGTCTCCGGAACTGGTGGGGCTCCTGATGCAGGTGGACCTGGACGCCCATATTCCGCCCAAGCTGTACGTCGCCATCGCCGAACTGCTGGCCTGGCTGTACGCCCTGGACACCGGGGGCGAAGGCGTCGTGAAGAAACCGTCCTAG
PROTEIN sequence
Length: 100
MKSRPADSYRPSAVAITYDQDDQAPRVVAKGYGNLAETIIRTAREHGLYIHESPELVGLLMQVDLDAHIPPKLYVAIAELLAWLYALDTGGEGVVKKPS*