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SCNpilot_solid_1_scaffold_20_94

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 91648..92400

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ14_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 257.0
  • Bit_score: 326
  • Evalue 3.30e-86
  • rbh
RNA polymerase sigma factor for flagellar operon similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 250.0
  • Bit_score: 402
  • Evalue 7.80e-110
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellanie similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 250.0
  • Bit_score: 402
  • Evalue 3.90e-109

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGCCCCTGTCCGAGGATCAGCTGATCGCCCAATACGCGCCGCTGGTGCGCCGCCAGGCCTTGTCGCTGGTCGGGCGCCTGCCCGCCAGCGTCGAACTCGATGACCTGATGCAGGCCGGCATGATGGGGCTGCTCGATGCCGTGCGCCGGTATCAGCAGCAGGCCGACGCCCAGTTCGAGACCTATGCCATCACCCGGATCCGCGGCGCCATGCTGGACGAACTGCGCAGCCAGGACTGGCTGCCGCGCAGCGTGCGCAGCAAGGCCCGGTCCATCGAAGAGGCCGTGCAGGCCCTGCACCACCGCCTGCTGCGCCCGCCCAGCGAAACGGAAATCGCGGACGAAATGGGTCTGGAGCTGTCGGATTACCAGACGTTGCTGGAAGAAGCGCGCGGCGTGCAGGTGCTGATGGTCGAAGACCTGGTGCAGCACCGGGAAGACGCGAGCGGCGACGCCGTGCTGGATTCCGTCGCCGGGTCGGGCAGCGCCAATCCCCTGGACTGGCTGCTGCGCGACGGCCTGCGCAATGCGCTGGTGGATGCCATCCGCAATCTGCCGGAACGCGAGCAACTGCTGCTGTCCCTGCAATTCGAGCAGGACCTGAACCAGAAGGAAATCGCGGCCGTGCTGCAGGTGACGGAAGGGCGGGTGTCCCAGTTGCGGTCCCAGGCCGTCGCGCGGATCCGGGCCTGGCTGTCCAGCCATTCCTGGGAACTCGACGCGGGCGAGGCCGATTTCGAGAATCTGTTGTAG
PROTEIN sequence
Length: 251
MPLSEDQLIAQYAPLVRRQALSLVGRLPASVELDDLMQAGMMGLLDAVRRYQQQADAQFETYAITRIRGAMLDELRSQDWLPRSVRSKARSIEEAVQALHHRLLRPPSETEIADEMGLELSDYQTLLEEARGVQVLMVEDLVQHREDASGDAVLDSVAGSGSANPLDWLLRDGLRNALVDAIRNLPEREQLLLSLQFEQDLNQKEIAAVLQVTEGRVSQLRSQAVARIRAWLSSHSWELDAGEADFENLL*