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SCNpilot_solid_1_scaffold_52_38

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(47110..48021)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudomonas sp. CFT9 RepID=S6H4Q3_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 296.0
  • Bit_score: 284
  • Evalue 1.70e-73
LysR family transcriptional regulator {ECO:0000313|EMBL:KAK45408.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 293.0
  • Bit_score: 299
  • Evalue 5.60e-78
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 296.0
  • Bit_score: 276
  • Evalue 7.90e-72

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Taxonomy

Burkholderia jiangsuensis → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGATTCAATTTTCAATCCGGCAGCTGGAATACTTCGTCGCGGTCGCCCGGCACGGCGGCACGCTGCAGGCCGCGCGCGTCCTGAACGTGTCGCAGCCTTCGATTTCCCATGCCATCCGCGAACTCGAAGCGAGCTGGGGGGTGTCCCTGTTCGTGCGGCGGCATGCGCGCGGCCTGCAGCTGACGGCGGAAGGCGAACAGCGTTTCCGCCAGGCCATGCTCCTGCTGCGCGAAGCGCATTCCCTGGAACAGCGGACGGAACGGAGCATCCGCGGAGACCTGGCCGTGGGCTGTTTCGAAACGCTGGGGCCTTTGGTGTTTCCGGCCCTGATGAAAGCATTCCAGCGGCATCACCCGGACGTGCGGCTGCGGCCGCATGAAGGGCATATCGCCGATCTGCTGGACCGGGTGGCCGATGGTGCCCTGGAACTGGCGCTGGTCTACGACACCAGCCTGGCGGGCGGGCGGATCCGCTTGCACGACGTCGGCGCCAGCCAGCCCTATGCCGTGCTGCCGGCCGGGCATCCCCTGGCCTTGCAGCCCGACGTGTCGGTGGCGGATCTGGCGCGGCATCCCTTCATCCTGATCAATCCGCCGCATAGCCGGGAATACTTCCTGTCCCTGTTCAGCCACGCGGGAGTGCGGCCGCAGGTGGTGGCGGAAGTCGGGTCGTTCGAAATGGTCCGGGCCCTGGTGGCCAACGGGCACGGCGTTTCGATCCTGGTGACGCGCCCCGCGGGCGACCTGGCCTACGATGGCAGCCCCCTGGCGTGCCGCCCTTTGCGGGATGCGCCGCCGCCCCAGAAGATCGTGCTGGCCAGCGCGGCCGACCTGCCCCTGGGCATCGTGGCGCAGGCCTTTCTGGATCTGGCGCGCGATTATCTGTCGGGCCGGGGCATGGGCGGCGGCTAG
PROTEIN sequence
Length: 304
MIQFSIRQLEYFVAVARHGGTLQAARVLNVSQPSISHAIRELEASWGVSLFVRRHARGLQLTAEGEQRFRQAMLLLREAHSLEQRTERSIRGDLAVGCFETLGPLVFPALMKAFQRHHPDVRLRPHEGHIADLLDRVADGALELALVYDTSLAGGRIRLHDVGASQPYAVLPAGHPLALQPDVSVADLARHPFILINPPHSREYFLSLFSHAGVRPQVVAEVGSFEMVRALVANGHGVSILVTRPAGDLAYDGSPLACRPLRDAPPPQKIVLASAADLPLGIVAQAFLDLARDYLSGRGMGGG*