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SCNpilot_solid_1_scaffold_52

Search features with annotation key words

Displaying items 31-60 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_52_31
R_Alphaproteobacteria_46_13, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36962..38968
DNA (2007bp) protein (669aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00036082E9 rbh
acyltransferase 3 Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated
putative Acetylase
SCNpilot_solid_1_scaffold_52_32
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39173..40435
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GP36_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC21699.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (s
SCNpilot_solid_1_scaffold_52_33
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40510..42792)
DNA (2283bp) protein (761aa)
Serine protease n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MDS3_BORPB
outer membrane autotransporter barrel domain-containing protein
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:KDD57628.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;"
SCNpilot_solid_1_scaffold_52_34
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42887..43408)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00030D6350
NusG antitermination factor
Transcription antitermination protein nusG {ECO:0000313|EMBL:ABM38432.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Po
SCNpilot_solid_1_scaffold_52_35
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43592..45076)
DNA (1485bp) protein (495aa)
Xanthine permease n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0JB15_ALCFA rbh
Xanthine permease rbh
Xanthine permease {ECO:0000313|EMBL:CDM22515.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragra
SCNpilot_solid_1_scaffold_52_36
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45349..46077
DNA (729bp) protein (243aa)
Histidine utilization repressor n=2 Tax=Alcaligenes RepID=M5J1G2_9BURK
Histidine utilization repressor {ECO:0000313|EMBL:KGP02915.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faec
hutC; histidine utilization repressor, transcription regulator GntR
SCNpilot_solid_1_scaffold_52_37
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46084..47034)
DNA (951bp) protein (317aa)
Formiminoglutamase (EC:3.5.3.8) rbh
Formimidoylglutamase {ECO:0000256|HAMAP-Rule:MF_00737, ECO:0000256|SAAS:SAAS00012446}; EC=3.5.3.8 {ECO:0000256|HAMAP-Rule:MF_00737, ECO:0000256|SAAS:SAAS00012446};; Formiminoglutamase {ECO:0000256|HAM
Formimidoylglutamase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R2Z6_CUPTR rbh
SCNpilot_solid_1_scaffold_52_38
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47110..48021)
DNA (912bp) protein (304aa)
LysR family transcriptional regulator n=1 Tax=Pseudomonas sp. CFT9 RepID=S6H4Q3_9PSED
LysR family transcriptional regulator {ECO:0000313|EMBL:KAK45408.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
LysR family transcriptional regulator
SCNpilot_solid_1_scaffold_52_39
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48179..49390
DNA (1212bp) protein (404aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQT7_DELAS rbh
L-carnitine dehydratase/bile acid-inducible protein F
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EZP52098.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" so
SCNpilot_solid_1_scaffold_52_40
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49420..50559
DNA (1140bp) protein (380aa)
acdA; acyl-CoA dehydrogenase AcdA (EC:1.3.99.-) rbh
acyl-CoA dehydrogenase n=1 Tax=Cupriavidus sp. WS RepID=UPI0003804F86 rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KJK25347.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
SCNpilot_solid_1_scaffold_52_41
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50594..51163)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QUY3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ETF03105.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
hypothetical protein
SCNpilot_solid_1_scaffold_52_42
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51189..51983)
DNA (795bp) protein (265aa)
Mlr8761 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q989W4_RHILO
hypothetical protein
Mlr8761 protein {ECO:0000313|EMBL:BAB52580.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAF
SCNpilot_solid_1_scaffold_52_43
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51973..52725)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Nocardiopsis prasina RepID=UPI0003451DC5
ABC transporter permease {ECO:0000313|EMBL:KGY27107.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosox
binding-protein-dependent transporter inner membrane component family protein 65
SCNpilot_solid_1_scaffold_52_44
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52738..53496)
DNA (759bp) protein (253aa)
ABC transporter related protein id=2045904 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Putative ABC transport proteins, ATP-binding component
SCNpilot_solid_1_scaffold_52_45
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53506..54513)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI0003634B52
nitrate ABC transporter substrate-binding protein
Sulfonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:AKH85460.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptom
SCNpilot_solid_1_scaffold_52_46
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54571..55899)
DNA (1329bp) protein (443aa)
Carboxylyase-related protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13FV8_BURXL rbh
ubiD; ubiD decarboxylase family protein
Carboxylyase-related protein {ECO:0000313|EMBL:ABE37031.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia
SCNpilot_solid_1_scaffold_52_47
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55961..56539)
DNA (579bp) protein (193aa)
ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodosp
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INR8_RHOCS
SCNpilot_solid_1_scaffold_52_48
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56918..57748
DNA (831bp) protein (277aa)
Extracellular solute-binding protein family 3 n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TG47_BURSG rbh
extracellular solute-binding protein family 3
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ADN61588.1}; Flags: Precursor;; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; B
SCNpilot_solid_1_scaffold_52_49
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57839..58489
DNA (651bp) protein (217aa)
amino acid ABC transporter n=1 Tax=Burkholderia bryophila RepID=UPI00036F6480
polar amino acid ABC transporter inner membrane subunit
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:EDT07452.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholde
SCNpilot_solid_1_scaffold_52_50
Burkholderia sp. 2002721687, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58489..59151
DNA (663bp) protein (221aa)
amino acid ABC transporter n=1 Tax=Burkholderia kururiensis RepID=UPI0003464BFA
amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein
Amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein {ECO:0000313|EMBL:AJY38227.1}; TaxID=1468409 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholder
SCNpilot_solid_1_scaffold_52_51
Pseudomonas batumici, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59167..59985
DNA (819bp) protein (273aa)
ABC transporter n=1 Tax=Burkholderia bryophila RepID=UPI00035FEEE5 rbh
Glutamine transport ATP-binding protein GlnQ {ECO:0000313|EMBL:KIH83810.1}; TaxID=226910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sourc
ABC transporter-like protein
SCNpilot_solid_1_scaffold_52_52
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60027..61244
DNA (1218bp) protein (406aa)
Aromatic amino acid aminotransferase {ECO:0000313|EMBL:EJC61213.1}; EC=2.6.1.57 {ECO:0000313|EMBL:EJC61213.1};; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Al
tyrB2; aromatic amino acid aminotransferase (EC:2.6.1.57)
Aromatic amino acid aminotransferase n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UL34_ALCFA rbh
SCNpilot_solid_1_scaffold_52_53
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61241..62746
DNA (1506bp) protein (502aa)
D-2-hydroxyglutarate dehydrogenase n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UHH6_ADVKW rbh
putative D-2-hydroxyacid dehydrogenase rbh
Putative D-2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:AHG66010.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigard
SCNpilot_solid_1_scaffold_52_54
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62855..64558
DNA (1704bp) protein (568aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0B5F8_ALCFA rbh
SCNpilot_solid_1_scaffold_52_55
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64632..66170
DNA (1539bp) protein (513aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|R
Histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0JB90_ALCFA rbh
SCNpilot_solid_1_scaffold_52_56
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66187..66522)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL04 RepID=U8MBL1_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ERV78221.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
XRE family transcriptional regulator
SCNpilot_solid_1_scaffold_52_57
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66519..66857)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL04 RepID=U8MBF3_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ERV78220.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
hypothetical protein
SCNpilot_solid_1_scaffold_52_58
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67045..68295)
DNA (1251bp) protein (417aa)
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase {ECO:0000255|HAMAP-Rule:MF_00372}; EC=3.5.2.7 {ECO:0000255|HAMAP-Rule:MF_00372};; Imidazolone-5-propionate hydrolase {ECO:0000255|HAMAP-Rule:MF_00372}; TaxID=264198 species="Bact
Imidazolonepropionase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=HUTI_CUPPJ rbh
SCNpilot_solid_1_scaffold_52_59
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68338..69615)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS96_PUSST rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM23449.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_52_60
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69605..70231)
DNA (627bp) protein (209aa)
Transcriptional regulator n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS95_PUSST
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEC20826.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp.
Displaying items 31-60 of 107 in total

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