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SCNpilot_solid_1_scaffold_52

Search features with annotation key words

Displaying items 61-90 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_52_61
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70354..73623)
DNA (3270bp) protein (1090aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=513051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkho
DNA polymerase III, alpha subunit (EC:2.7.7.7)
Error-prone DNA polymerase n=1 Tax=Burkholderia multivorans CGD1 RepID=B9BFE8_9BURK rbh
SCNpilot_solid_1_scaffold_52_62
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73630..75036)
DNA (1407bp) protein (469aa)
Nucleotidyltransferase/DNA polymerase n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5AP20_BURGB rbh
nucleotidyltransferase/DNA polymerase
Nucleotidyltransferase/DNA polymerase {ECO:0000313|EMBL:ACR32963.1}; TaxID=626418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burk
SCNpilot_solid_1_scaffold_52_63
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74975..75817)
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Burkholderia dolosa AUO158 RepID=A2W7A1_9BURK
putative cell division inhibitor protein
Recombinase RecA {ECO:0000313|EMBL:AKE06652.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source
SCNpilot_solid_1_scaffold_52_64
Betaproteobacteria bacterium MOLA814, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75885..77438)
DNA (1554bp) protein (518aa)
HTH-type transcriptional regulatory protein GabR n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V5AH03_9PROT rbh
HTH-type transcriptional regulatory protein GabR {ECO:0000313|EMBL:ESS14885.1}; TaxID=1408164 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="Betaproteobacteria bacterium MOLA814.;"
GntR family transcriptional regulator rbh
SCNpilot_solid_1_scaffold_52_65
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77610..78923
DNA (1314bp) protein (438aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
hisD1; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Osedax symbiont Rs2 RepID=S6GEN9_9GAMM rbh
SCNpilot_solid_1_scaffold_52_66
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78954..80147
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036996EC rbh
Putative pyridoxal phosphate-dependent enzyme {ECO:0000313|EMBL:EDQ35304.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Ho
DegT/DnrJ/EryC1/StrS aminotransferase
SCNpilot_solid_1_scaffold_52_67
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80193..81173
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000372C1C2 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO54911.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica
hypothetical protein
SCNpilot_solid_1_scaffold_52_68
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81257..82729
DNA (1473bp) protein (491aa)
aromatic-L-amino-acid decarboxylase (EC:4.1.1.28)
Aromatic-L-amino-acid decarboxylase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA93_9PROT rbh
Cytochrome D ubiquinol oxidase subunit I {ECO:0000313|EMBL:GAO35722.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="
SCNpilot_solid_1_scaffold_52_69
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82739..83221)
DNA (483bp) protein (161aa)
Single-stranded DNA-binding protein n=1 Tax=Bordetella avium (strain 197N) RepID=Q2L1W7_BORA1
Single-stranded DNA-binding protein rbh
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1437824 species="Bacteria; Proteobacteria; Bet
SCNpilot_solid_1_scaffold_52_70
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83550..85145
DNA (1596bp) protein (532aa)
Dipeptide ABC transporter periplasmic substrate-binding protein DppA n=1 Tax=Providencia burhodogranariea DSM 19968 RepID=K8WI07_9ENTR rbh
Dipeptide-binding ABC transporter, periplasmic substrate-binding component rbh
Dipeptide-binding ABC transporter, periplasmic substrate-binding component {ECO:0000313|EMBL:CDM23638.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcalige
SCNpilot_solid_1_scaffold_52_71
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85290..86318
DNA (1029bp) protein (343aa)
Dipeptide transporter permease DppB n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DK57_CITFR rbh
Dipeptide transport system permease protein DppB rbh
Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:CDM23639.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;"
SCNpilot_solid_1_scaffold_52_72
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86315..87208
DNA (894bp) protein (298aa)
Dipeptide transport system permease dppC n=2 Tax=Enterobacteriaceae RepID=E5YML7_9ENTR rbh
Dipeptide transport system permease protein DppC rbh
Dipeptide transport system permease protein DppC {ECO:0000313|EMBL:CDM23640.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;"
SCNpilot_solid_1_scaffold_52_73
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87220..88215
DNA (996bp) protein (332aa)
Dipeptide transport ATP-binding protein DppD n=1 Tax=Serratia fonticola AU-P3(3) RepID=U2L961_SERFO rbh
Dipeptide transport ATP-binding protein DppD rbh
Dipeptide transport ATP-binding protein DppD {ECO:0000313|EMBL:CDM23641.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sour
SCNpilot_solid_1_scaffold_52_74
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88212..89240
DNA (1029bp) protein (343aa)
Dipeptide transporter ATP-binding subunit n=2 Tax=Edwardsiella tarda RepID=D0ZGQ0_EDWTE rbh
Dipeptide transport ATP-binding protein DppF rbh
Dipeptide transport ATP-binding protein DppF {ECO:0000313|EMBL:CDM23642.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sour
SCNpilot_solid_1_scaffold_52_75
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89272..90039)
DNA (768bp) protein (256aa)
ABC transporter related n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PMJ7_RHOS1
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABN77563.1}; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaer
SCNpilot_solid_1_scaffold_52_76
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90036..90872)
DNA (837bp) protein (279aa)
ABC transporter n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LR78_9PROT
ABC transporter {ECO:0000313|EMBL:EKF07392.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profund
ABC transporter
SCNpilot_solid_1_scaffold_52_77
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90878..91765)
DNA (888bp) protein (296aa)
cytochrome C550 n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E8DEC
D-ala-D-ala transporter subunit {ECO:0000313|EMBL:KGM34723.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilin
putative transmembrane component of ABC transporter
SCNpilot_solid_1_scaffold_52_78
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91762..92817)
DNA (1056bp) protein (352aa)
peptide ABC transporter permease n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375A78 rbh
Peptide ABC transporter permease {ECO:0000313|EMBL:KFG67404.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
SCNpilot_solid_1_scaffold_52_79
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92861..94459)
DNA (1599bp) protein (533aa)
Extracellular solute-binding protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TKG9_TISMK rbh
extracellular solute-binding protein rbh
Extracellular solute-binding protein {ECO:0000313|EMBL:AFK53257.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tist
SCNpilot_solid_1_scaffold_52_80
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94492..95952)
DNA (1461bp) protein (487aa)
Aldehyde dehydrogenase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LKM6_9RHIZ
Aldehyde dehydrogenase {ECO:0000313|EMBL:EKF18299.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor p
aldehyde dehydrogenase
SCNpilot_solid_1_scaffold_52_81
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95949..97331)
DNA (1383bp) protein (461aa)
Aminotransferase {ECO:0000313|EMBL:ABM58926.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABM58926.1};; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminep
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00038231AC rbh
class III aminotransferase
SCNpilot_solid_1_scaffold_52_82
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97433..98170)
DNA (738bp) protein (246aa)
UPI00039DCCC9 related cluster n=1 Tax=unknown RepID=UPI00039DCCC9 rbh
putative enoyl-CoA hydratase/isomerase Tax=RBG_13_Deltaproteobacteria_47_9_curated
enoyl-CoA hydratase/isomerase family protein
SCNpilot_solid_1_scaffold_52_83
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98198..100306)
DNA (2109bp) protein (703aa)
Putative acyl-CoA synthetase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13PC3_BURXL rbh
coA binding domain protein rbh
Putative acyl-CoA synthetase {ECO:0000313|EMBL:ABE34066.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia
SCNpilot_solid_1_scaffold_52_84
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100406..101584)
DNA (1179bp) protein (393aa)
L-carnitine dehydratase/bile acid-inducible protein F (EC:2.8.3.16)
Carnitine dehydratase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JDN0_9BURK rbh
Carnitine dehydratase {ECO:0000313|EMBL:ESJ23499.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(
SCNpilot_solid_1_scaffold_52_85
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101672..102448
DNA (777bp) protein (259aa)
IclR family transcriptional regulator n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2KAP8_9BURK rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:ESJ23498.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupr
Transcriptional regulator, IclR family
SCNpilot_solid_1_scaffold_52_86
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102473..103672)
DNA (1200bp) protein (400aa)
Putative transport protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GWZ9_PUSST rbh
Putative transport protein rbh
Putative transport protein {ECO:0000313|EMBL:CDM22858.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella
SCNpilot_solid_1_scaffold_52_87
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103761..106622
DNA (2862bp) protein (954aa)
UvrABC system protein A n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GX00_PUSST rbh
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC
SCNpilot_solid_1_scaffold_52_88
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106689..107372
DNA (684bp) protein (228aa)
Response regulator protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IJ61_BORPD
Tricarboxylate transport transcriptional regulator TctD rbh
Tricarboxylate transport transcriptional regulator TctD {ECO:0000313|EMBL:CDM22855.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellanie
SCNpilot_solid_1_scaffold_52_89
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107359..108765
DNA (1407bp) protein (469aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca
His Kinase A phosphoacceptor domain protein 14 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HU85_ACHXA rbh
Tricarboxylate transport sensor protein TctE rbh
SCNpilot_solid_1_scaffold_52_90
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108773..111499)
DNA (2727bp) protein (909aa)
Putative diguanylate cyclase (GGDEF domain) n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SR77_RHOPH rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM22856.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
Displaying items 61-90 of 107 in total

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