ggKbase home page

SCNpilot_solid_1_scaffold_52_84

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(100406..101584)

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydratase/bile acid-inducible protein F (EC:2.8.3.16) similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 386.0
  • Bit_score: 575
  • Evalue 1.10e-161
Carnitine dehydratase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JDN0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 392.0
  • Bit_score: 581
  • Evalue 5.20e-163
  • rbh
Carnitine dehydratase {ECO:0000313|EMBL:ESJ23499.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC( similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 392.0
  • Bit_score: 581
  • Evalue 7.40e-163

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cupriavidus sp. HPC(L) → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGGATGAGTTGAACGAACGGGGACTGCCCCTGGCCGGTGTCAAGGTCGTTGAATTCTGTTCCGTGGCCGCGGGGCCGTTTTGCGGCATGCTGCTGGCCGATATGGGGGCGGACGTCGTCAAGGTCGAAGCGCCGGGCGGAGATTCGCTGCGGACATGGCCGCCGTTGACCGGGGGCTACAGCGAGAATTTCGCCTCCCTGAACCGGAACAAGCGTTCGGCCGTGCTGAATCTGAAGGACTCCGCCGATCTGTCTCTGGCCCGCCGGCTTGTGCTGGATGCCGACGTGGTGATCGAAAACAACCGGCCCGGCGTCATGAAGCGTCTGGGGCTCGATTTCTCCAGCTTCCGGCGGCAGAGGCCCGACCTGGTCTACTGCTCGATTTCCGCTTACGGGCAGACGGGACCCAGGGCCGACGAAGGCGGGTTCGATCTGACGATCCAGGCGGCGGCGGGCGTCATGAGCGTGACGGGCGAGCCGCAGGGCTTGCCCGCCAAGTGCGGCGTGCCGGTGTCCGATTTCGCTTCCGGACTGTATGCGGCGTTCGCCATTGCCGCCAAGCTGGCGCATGTGCGCGCCGGCGGCGACGGCGCGCACATCGACGTGTCGATGTTTGGCTGCACACTGGGAATCGCCGCCTTGCAGACCAGCGAGTATTTCGGCGCGGGCCGGGACCCCGGACGGCTGGGGTCCGCGCATCCGCGCAACGCGCCGTATCAGGCTTACCAGGCGGCGGACGGGTATTTCGCGATCGCGGCGGGCAATCACAAACTCTGGGTGGCTGTCTGCGATGCGGTCGGCCTGGCCCATCTGCCCGAGGATCCGCGCTTCCTGACGACGACGGATCGCGCCCGCCACCAGGCGGATCTCAAGGAAATCCTCGAGTCCCGCTTTCAGGAACAACCGGTCGATCACTGGATCGATGTATTCAACCGGGCCGGGGTGCCGCATGCGCGGATCAATACCTATTCCGCGGCGCTGGCCGACCCGCAGGTGGCGCACATGCAGTGGGTGCAGGCCCTGGATCTGCCCGGCGGAGCGCGAACGAAGACCTTCGTATCCCCCCTGAGGCTGGATGGCCGGGGACTGCCGGTGCGCCTGGGCCCGCCCGGCCTGGGCGAGCATACCGACAGCCTCCGCGCGGCTTTTTCCGCGAATCTGAGGGAAGCGAGATCGTGA
PROTEIN sequence
Length: 393
MDELNERGLPLAGVKVVEFCSVAAGPFCGMLLADMGADVVKVEAPGGDSLRTWPPLTGGYSENFASLNRNKRSAVLNLKDSADLSLARRLVLDADVVIENNRPGVMKRLGLDFSSFRRQRPDLVYCSISAYGQTGPRADEGGFDLTIQAAAGVMSVTGEPQGLPAKCGVPVSDFASGLYAAFAIAAKLAHVRAGGDGAHIDVSMFGCTLGIAALQTSEYFGAGRDPGRLGSAHPRNAPYQAYQAADGYFAIAAGNHKLWVAVCDAVGLAHLPEDPRFLTTTDRARHQADLKEILESRFQEQPVDHWIDVFNRAGVPHARINTYSAALADPQVAHMQWVQALDLPGGARTKTFVSPLRLDGRGLPVRLGPPGLGEHTDSLRAAFSANLREARS*