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SCNpilot_solid_1_scaffold_73_75

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(82009..82281)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Pusillimonas noertemannii RepID=UPI00030D3A31 similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 90.0
  • Bit_score: 170
  • Evalue 6.50e-40
DNA-binding protein HU-beta similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 90.0
  • Bit_score: 173
  • Evalue 2.10e-41
DNA-binding protein HU-beta {ECO:0000313|EMBL:CDM23986.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniell similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 90.0
  • Bit_score: 173
  • Evalue 1.10e-40

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGAACAAGACCGAGCTGATCGAGCACATTTCCTCCAAGACCGATCTCTCCAAGGCCGACGTCGGTCGTGCCCTGGAAGCCTTTGTCGGCGCCGTGAAGACCACCCTGAAGAAGAAAGGGTCGGTCACGCTGGTCGGCTTCGGCACCTTTGCCGTGTCCGAGCGCGCCGCCCGTACCGGCCGCAACCCGCGCACCGGCGAAGCCATCAAGATCAAGAAGGCCCGCGTGCCGAAGTTCCGTCCGGGCAAGGCCCTGAAGGACGCCGTCAACTGA
PROTEIN sequence
Length: 91
MNKTELIEHISSKTDLSKADVGRALEAFVGAVKTTLKKKGSVTLVGFGTFAVSERAARTGRNPRTGEAIKIKKARVPKFRPGKALKDAVN*