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SCNpilot_solid_1_scaffold_73_78

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(84673..87117)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1437824 species="Bacteria; Proteobacteria; Bet similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 814.0
  • Bit_score: 1429
  • Evalue 0.0
Ribonuclease R n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GN50_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 810.0
  • Bit_score: 1161
  • Evalue 0.0
  • rbh
3'-to-5' exoribonuclease RNase R similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 814.0
  • Bit_score: 1429
  • Evalue 0.0
  • rbh

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2445
TTGAAAAAGCGAACCAACAACAACGACAATAACCACGACGCTTCCTTCGTGCCTAATGCGGATCTGCCCGCTGACTTCGATCCCAAGGTACCCAGCCGCGAACAGGTGCTCGACGCCCTGCGCCACGCCGACAAACCTCTGTCTCTAGAAGCCCTGGCCGACACGACCCAGGCCTCGATCCCCCTGTCCACAGGATTCATCCGCCGCATCAAGGCCATGGAACGCGACGGCCAGGTGCGCTTCAATGCCCAGGGAAGGTTGCAAATATGCAACAACACCGAATTCATCGCCGGTACCGTCCAGGGGCATCGCGACGGCTACGGCTTCCTGATTCCCGATGACGGCAGCCGCGACCTGTTCCTGTCCACCCATGAAATGGGCAAGGTCCTGCACGGCGACCGCGTCCGGGTCCGCGCCAGCGGCGAATACCGCGGCCGCCCCGAAGGCACCATCGTCGAGGTCCTGGAACGCCGCACCGTCAAGCTGGTGGGCCGATTCCTGAAGGAACACGGCGCTTTCGTCGTCGCCCCCGAAGATCAGCGCATCAAGCACGACATCCTGATTGCCGCCCAGGACACCGCCGGCGCCGAGCCCGGCCAGGTCGTCACGGTGCAGATCATGCGCCAGCCCGCCAGCCACATCCAGCCGCAGGGCCGCATCATCGAAGTGCTGGGCGAAATCGACGACCCCGGCATGGAAATCGAAATCGCCGTGCGCAAATTCGACGTGCCGGTGGATTTCTCCAAGGACACGCTGCGCCAGCTGGAATCCATTCCGGCCCAGGTGCGCGACGGCGAATACGCCGGACGCGTCGACCTGCGCGACGTGCCCTTCATCACCATCGACGGCGAAGACGCCCGCGACTTCGACGACGCCGTGTTCTGCATGGAAGCGGACCTGGGCACCGCCAAGCGCGCCCGCCCCGGCTGGCGGCTGCTGGTGGCCATCGCCGACGTCAGCCACTACGTGCGCCCGGGCTCCGCCCTGGACGACGACGCCCTGGATCGCGGCACCAGCGTGTATTTCCCGCGCCGGGTGATTCCCATGCTGCCCGAAGCCCTGTCCAACGGCATCTGCTCGCTGAACCCGGACGTCGACCGCCTGGTGATGGTCTGCGACATGATGATCCCGGCCGGCGGCGCCAAGGCCGGCACCGTGGCGGCCTACCAGTTCTACGAAGCCGTCATCCATTCGCACGCCCGCACCACCTACACCGACATCTGGGCCGCGCTGCAGCAGCCCAAGGGGCCGGCGGCGCAGAACCTGGGCGACCTGTACCCTCACGTGCAGACGGCCTACGAACTGTTCCAGGCCTTCGAACAGGCCCGCCGCGCGCGCGGGGCCATCGATTTCGACACAGTGGAAACGCGCATCGTCTGCAACCCGCTGGGGCGCATCGAGAAGATCGAGCCCTACACCCGCAACGACGCCCACAAGCTGATCGAGGAATGCATGCTGGCCGCCAACACCTGCGCGGCCGACTTCATCGTGCGCAACAAGCGCCAGGCGCTGTTCCGCGTGCACGACGGTCCCACCCCCGAGAAACTGCAGTCGCTGCGCGAGACCCTGCGCCATCTGGGCCTGAGCCTGGACGGCGGCGACGACCCGCAGACCAGCGACTACGCCAAGCTGATCCAGGCCAGCCGCGCCCGGCCCGATTTCGAGATCATCCAGACCCTGTGCCTGCGGTCGATGCAGCAGGCCATCTACAGTCCGGAACAGACGGGCCACTTCGGCCTGTCCTACGAACACTACGCGCACTTCACCTCGCCCATCCGCCGTTACCCTGATCTGCTGGTGCACCGCGTCATCCGCGGCATCCTGCACAAGCAGCACTACCAGCCGCCGGTCCTGCCGGGCGAACCCGTGGACCCGACCCTGCCGGCCAAGGCCCGCGAACACGATGCCTGGGACGCGCTGGGGGCGCTGCTGTCGGCCCGCGAACGCCGCGCCGACGACGCCTCGCGCGACGTCCAGGCCTGGCTGAAGTGCTGGTTCGTGCGCGAACGCGTGGGCGAAGTCTTCAGCGGCCGCATCACCGGCGTCACCAGTTTCGGGGTGTTCGTCACCCTGGACACCCTGTACGTGGAAGGCCTGGTGCACATTTCCGAACTGGGCAGCGACTACTTCCAGTACAACGAGGCCCTGAACGAACTGCGCGGCGAGCGCACGGGATTCCGCTACCAGCTGGGCGACACGCTGCAGGTGCAGGTGTCGCGCGTCGACCTGGAAGCCCGCCGCATCGACTTCCGCCTGGTGCGGGGCGAAGACTTCAAATCGCTGCAGGCCGAAATCGAAGGCGATCCGCGCACGACCACGCAGCGGCCGCGCAAAAAGGCCGCGGGCGCCAAGCCCGCCGCGCTGCGGGGCACCACGGCCCGCCAGCGCCGCGCCGAGGCCAAGCGCGCCAGCCGCCAGGAAACCCCGCGCAAGCGGCGCGGCTGA
PROTEIN sequence
Length: 815
LKKRTNNNDNNHDASFVPNADLPADFDPKVPSREQVLDALRHADKPLSLEALADTTQASIPLSTGFIRRIKAMERDGQVRFNAQGRLQICNNTEFIAGTVQGHRDGYGFLIPDDGSRDLFLSTHEMGKVLHGDRVRVRASGEYRGRPEGTIVEVLERRTVKLVGRFLKEHGAFVVAPEDQRIKHDILIAAQDTAGAEPGQVVTVQIMRQPASHIQPQGRIIEVLGEIDDPGMEIEIAVRKFDVPVDFSKDTLRQLESIPAQVRDGEYAGRVDLRDVPFITIDGEDARDFDDAVFCMEADLGTAKRARPGWRLLVAIADVSHYVRPGSALDDDALDRGTSVYFPRRVIPMLPEALSNGICSLNPDVDRLVMVCDMMIPAGGAKAGTVAAYQFYEAVIHSHARTTYTDIWAALQQPKGPAAQNLGDLYPHVQTAYELFQAFEQARRARGAIDFDTVETRIVCNPLGRIEKIEPYTRNDAHKLIEECMLAANTCAADFIVRNKRQALFRVHDGPTPEKLQSLRETLRHLGLSLDGGDDPQTSDYAKLIQASRARPDFEIIQTLCLRSMQQAIYSPEQTGHFGLSYEHYAHFTSPIRRYPDLLVHRVIRGILHKQHYQPPVLPGEPVDPTLPAKAREHDAWDALGALLSARERRADDASRDVQAWLKCWFVRERVGEVFSGRITGVTSFGVFVTLDTLYVEGLVHISELGSDYFQYNEALNELRGERTGFRYQLGDTLQVQVSRVDLEARRIDFRLVRGEDFKSLQAEIEGDPRTTTQRPRKKAAGAKPAALRGTTARQRRAEAKRASRQETPRKRRG*