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SCNpilot_solid_1_scaffold_264_43

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 36263..36466

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase omega subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 67.0
  • Bit_score: 123
  • Evalue 1.90e-26
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 67.0
  • Bit_score: 123
  • Evalue 9.40e-26
DNA-directed RNA polymerase subunit omega n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037A25ED similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 67.0
  • Bit_score: 111
  • Evalue 2.70e-22

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCCCGCATCACCGTCGAAGACTGCCTCCAGCAGATTCCCAACCGCTTTGATCTGACTCTGGCGGCCACCTACCGCGCCCGCGAACTGGCCCAGGGCCACGAAGCGCGCATCCAGAGCCACAACAAACCCACCGTGACCGCATTGCGCGAAATCGCCCAGAGCCAGGTCGGCACTGAAATGCTGCGCAAGGTCCCCACCTGA
PROTEIN sequence
Length: 68
MARITVEDCLQQIPNRFDLTLAATYRARELAQGHEARIQSHNKPTVTALREIAQSQVGTEMLRKVPT*