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SCNpilot_solid_1_scaffold_509_38

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(38203..38586)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HEA9_ACHXA similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 127.0
  • Bit_score: 245
  • Evalue 2.90e-62
LSU ribosomal protein L13p similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 127.0
  • Bit_score: 255
  • Evalue 6.00e-66
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 127.0
  • Bit_score: 255
  • Evalue 3.00e-65

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
TTTGTGATCGACGCCAAGGGCAAGGTCCTCGGCCGTGTGGCCAGCGAAGTCGCACGCCGTCTGCGTGGCAAGCACAAACCCGAATTCACGCCGCACGTTGACACGGGCGATTACATCGTCGTCGTCAATGCCGCCGATATCGTCGTGACCGGCGCCAAGGCGCAGGACAAACGCTACTACCGTCACTCCACCTATCCGGGCGGGATCACGGAAACCAACTTCCAGAAAATGCAGCAGCGTTTTCCGGGCCGCGCCCTGCAGAAAGCCGTCAAAGGCATGCTGCCCAAGGGGCCGTTGGGTTACGCCATGGCGAAAAAGCTGAAGGTCTATGCGGGCGCCGAGCACCCGCATACCGCGCAGCAGCCGCAAACCCTGGATATTTGA
PROTEIN sequence
Length: 128
FVIDAKGKVLGRVASEVARRLRGKHKPEFTPHVDTGDYIVVVNAADIVVTGAKAQDKRYYRHSTYPGGITETNFQKMQQRFPGRALQKAVKGMLPKGPLGYAMAKKLKVYAGAEHPHTAQQPQTLDI*