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SCNpilot_solid_1_scaffold_2048

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_2048_1
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..1811)
DNA (1809bp) protein (603aa)
ABC transporter n=1 Tax=Humibacter albus RepID=UPI0003B4516E
ABC transporter {ECO:0000313|EMBL:KHK97216.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
ABC transporter
SCNpilot_solid_1_scaffold_2048_2
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1808..2218)
DNA (411bp) protein (137aa)
MarR family transcriptional regulator n=1 Tax=Humibacter albus RepID=UPI0003B31173
Uncharacterized protein {ECO:0000313|EMBL:KHK97241.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
MarR family transcriptional regulator
SCNpilot_solid_1_scaffold_2048_3
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2277..3230)
DNA (954bp) protein (318aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_02122};; Tetrahydrodipicolinate N-succinyltransferase {ECO
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003659F78 rbh
dapD; tetrahydrodipicolinate N-succinyltransferase
SCNpilot_solid_1_scaffold_2048_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3294..4370
DNA (1077bp) protein (359aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:KJL37280.1}; EC=3.5.1.18 {ECO:0000313|EMBL:KJL37280.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Micr
Succinyl-diaminopimelate desuccinylase n=2 Tax=Microbacterium RepID=H8E8B9_9MICO rbh
dapE; acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase
SCNpilot_solid_1_scaffold_2048_5
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4352..5575
DNA (1224bp) protein (408aa)
Predicted integral membrane protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NC20_MICTS
Membrane protein {ECO:0000313|EMBL:KEP75535.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
integral membrane protein
SCNpilot_solid_1_scaffold_2048_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5657..5827
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031DB037
Uncharacterized protein {ECO:0000313|EMBL:KJL37282.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_solid_1_scaffold_2048_7
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5845..6516)
DNA (672bp) protein (224aa)
O-methyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003682C87 rbh
O-methyltransferase
Predicted O-methyltransferase {ECO:0000313|EMBL:BAJ76065.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strai
SCNpilot_solid_1_scaffold_2048_8
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6591..6941
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000375CF3A
Translocase {ECO:0000313|EMBL:KHK98417.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
tatB; Sec-independent protein secretion pathway components
SCNpilot_solid_1_scaffold_2048_9
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6964..8133)
DNA (1170bp) protein (390aa)
sodium:proton antiporter n=1 Tax=Microbacterium sp. B19 RepID=UPI000347BF8B
Flagellum site-determining protein YlxH {ECO:0000313|EMBL:KJL32995.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadir
ATPase
SCNpilot_solid_1_scaffold_2048_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8130..8657)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000345CAD5
hypothetical protein
Predicted membrane protein {ECO:0000313|EMBL:BAJ76068.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain S
SCNpilot_solid_1_scaffold_2048_11
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8657..9946)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A4J3_9MICO rbh
Magnesium transporter {ECO:0000313|EMBL:KIC57734.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Mg/Co/Ni transporter MgtE
SCNpilot_solid_1_scaffold_2048_12
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10022..11089
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000361F815
Uncharacterized protein {ECO:0000313|EMBL:CDJ99419.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCNpilot_solid_1_scaffold_2048_13
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11046..11744
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000315A5FD
Hydrolase of the alpha/beta-hydrolase fold-containing protein {ECO:0000313|EMBL:CDJ99418.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source
hydrolase of the alpha/beta-hydrolase fold
SCNpilot_solid_1_scaffold_2048_14
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11902..13308)
DNA (1407bp) protein (469aa)
Xaa-Pro aminopeptidase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003715E60 rbh
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:KHK98411.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
Xaa-Pro aminopeptidase
Displaying 14 items

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