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SCNpilot_solid_1_scaffold_2695

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_2695_1
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..113)
DNA (111bp) protein (37aa)
lysine transporter LysE n=1 Tax=Citricoccus sp. CH26A RepID=UPI000255E20E
Lysine transporter LysE {ECO:0000313|EMBL:KHK96394.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
SCNpilot_solid_1_scaffold_2695_2
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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217..702
DNA (486bp) protein (162aa)
AsnC family transcriptional regulator n=1 Tax=Citricoccus sp. CH26A RepID=UPI000255E20D
AsnC family transcriptional regulator {ECO:0000313|EMBL:EQM79552.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium marityp
transcription regulator AsnC
SCNpilot_solid_1_scaffold_2695_3
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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751..1023
DNA (273bp) protein (91aa)
Integrase {ECO:0000313|EMBL:KJY23284.1}; TaxID=1609135 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
SCNpilot_solid_1_scaffold_2695_4
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1190..1504
DNA (315bp) protein (105aa)
integrase n=1 Tax=Streptomyces sp. SS RepID=UPI0003015651
integrase
Integrase {ECO:0000313|EMBL:AJF65003.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
SCNpilot_solid_1_scaffold_2695_trna_1
unknown

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comp(1565..1635)
DNA (71bp)
transferRNA
SCNpilot_solid_1_scaffold_2695_5
unknown

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1885..2337
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_2695_6
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

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2393..3277
DNA (885bp) protein (295aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WB63_KINRD
short chain dehydrogenase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABS04052.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans
SCNpilot_solid_1_scaffold_2695_7
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3310..3978)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI0003813B17
Uncharacterized protein {ECO:0000313|EMBL:KDA06401.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
Tetracyclin repressor, C-terminal all-alpha domain protein
SCNpilot_solid_1_scaffold_2695_8
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4073..4843
DNA (771bp) protein (257aa)
Tyrosine-protein phosphatase {ECO:0000313|EMBL:KJL31228.1}; EC=3.1.3.48 {ECO:0000313|EMBL:KJL31228.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium
protein tyrosine/serine phosphatase (EC:3.1.3.48)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000372CD54
SCNpilot_solid_1_scaffold_2695_9
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4882..5487
DNA (606bp) protein (202aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1348253 species="
deoxycytidine triphosphate deaminase n=1 Tax=Microbacterium paraoxydans RepID=UPI00035D55D5
dcd; deoxycytidine deaminase
SCNpilot_solid_1_scaffold_2695_10
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5603..6442)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DE2388
Uncharacterized protein {ECO:0000313|EMBL:CDK00078.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCNpilot_solid_1_scaffold_2695_11
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6697..7170
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KD32_9MICO
Transcriptional regulator {ECO:0000313|EMBL:CDK00077.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
transcriptional regulator
SCNpilot_solid_1_scaffold_2695_12
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7194..8588)
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000378D294 rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP27715.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein
SCNpilot_solid_1_scaffold_2695_13
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8585..9457)
DNA (873bp) protein (291aa)
N-acetylneuraminate synthase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEK9_9MICO rbh
N-acetylneuraminate synthase {ECO:0000313|EMBL:KDA05112.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
N-acetylneuraminate synthase rbh
SCNpilot_solid_1_scaffold_2695_14
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9549..10763)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000378A0E8 rbh
Acylneuraminate cytidylyltransferase {ECO:0000313|EMBL:KHK95178.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi
transferase
SCNpilot_solid_1_scaffold_2695_15
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10739..11095)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K2A1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM73333.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
Displaying 16 items

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