ggKbase home page

SCNpilot_solid_1_scaffold_3048

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_3048_1
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..346
DNA (345bp) protein (115aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
alkylhydroperoxidase n=1 Tax=Glaciibacter superstes RepID=UPI0003B687CD
Alkylhydroperoxidase AhpD core
SCNpilot_solid_1_scaffold_3048_2
Kocuria polaris, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

351..908
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Kocuria sp. UCD-OTCP RepID=UPI00035C7726
Oxidoreductase {ECO:0000313|EMBL:KHD96235.1}; TaxID=136273 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria polaris.;"
putative oxidoreductase
SCNpilot_solid_1_scaffold_3048_trna_1
unknown

Not on your lists

comp(955..1028)
DNA (74bp)
transferRNA
SCNpilot_solid_1_scaffold_3048_3
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1179..4085)
DNA (2907bp) protein (969aa)
membrane protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036B1991 rbh
UPF0182 protein LK09_11380 {ECO:0000256|HAMAP-Rule:MF_01600}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCNpilot_solid_1_scaffold_3048_4
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4130..5254)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000365B4E9 rbh
ATP-dependent serine peptidase containing a PDZ domain protein {ECO:0000313|EMBL:KHK97380.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" sourc
secreted protein containing a PDZ domain
SCNpilot_solid_1_scaffold_3048_5
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5389..6861
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035D61C8 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD32850.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCNpilot_solid_1_scaffold_3048_6
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7658..9427)
DNA (1770bp) protein (590aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036E4031 rbh
superfamily I DNA and RNA helicase
SCNpilot_solid_1_scaffold_3048_7
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9424..10092)
DNA (669bp) protein (223aa)
NTP pyrophosphohydrolase containing a Zn-finger, probably nucleic-acid-binding n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NC43_MICTS
NTP pyrophosphohydrolase containing a Zn-finger, probably nucleic-acid-binding
NTP pyrophosphohydrolase containing a Zn-finger, probably nucleic-acid-binding {ECO:0000313|EMBL:BAJ76086.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbac
SCNpilot_solid_1_scaffold_3048_8
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10162..11388
DNA (1227bp) protein (409aa)
Putative aminoglycoside phosphotransferase n=1 Tax=Microbacterium sp. TS-1 RepID=U2X5V5_9MICO rbh
Putative aminoglycoside phosphotransferase {ECO:0000313|EMBL:GAD32846.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp
aminoglycoside phosphotransferase
SCNpilot_solid_1_scaffold_3048_9
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11389..13731)
DNA (2343bp) protein (781aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003761FB3
superfamily I DNA and RNA helicase
Displaying 10 items

View Taxonomy