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SCNpilot_solid_1_scaffold_1217

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1217_1
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

223..960
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00036FF045
DNA polymerase III, subunits gamma and tau {ECO:0000313|EMBL:EZP25168.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ole
DNA polymerase III, gamma/tau subunits
SCNpilot_solid_1_scaffold_1217_2
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

964..1557
DNA (594bp) protein (198aa)
recombinase RecR n=1 Tax=Microbacterium sp. B19 RepID=UPI0003478A08 rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source
recR; recombinational DNA repair protein
SCNpilot_solid_1_scaffold_1217_3
unknown

Not on your lists

comp(1624..1899)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1217_4
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1986..2501
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003711641
Putative inner membrane transporter YedA {ECO:0000313|EMBL:KJL26897.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadi
hypothetical protein
SCNpilot_solid_1_scaffold_1217_5
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2557..3858
DNA (1302bp) protein (434aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
Aspartokinase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N7Y8_MICTS rbh
lysC; aspartokinase
SCNpilot_solid_1_scaffold_1217_6
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3984..5054
DNA (1071bp) protein (357aa)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AED3_9MICO rbh
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:M
asd; aspartate-semialdehyde dehydrogenase
SCNpilot_solid_1_scaffold_1217_7
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5136..6596
DNA (1461bp) protein (487aa)
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000
malate:quinone oxidoreductase n=1 Tax=Microbacterium sp. 11MF RepID=UPI00036183EB rbh
mqoA; dehydrogenase
SCNpilot_solid_1_scaffold_1217_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6710..7345
DNA (636bp) protein (212aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=400772 species="Bacteria; Actino
thymidine kinase n=1 Tax=Microbacterium yannicii RepID=UPI0002D5FD86 rbh
tdk; thymidine kinase
SCNpilot_solid_1_scaffold_1217_9
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7520..8284
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003757505 rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KDA06132.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH1
transcriptional regulator
SCNpilot_solid_1_scaffold_1217_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8284..9588
DNA (1305bp) protein (435aa)
lactate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003794101 rbh
Lactate dehydrogenase {ECO:0000313|EMBL:KIC57902.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
L-lactate dehydrogenase
SCNpilot_solid_1_scaffold_1217_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9617..10372)
DNA (756bp) protein (252aa)
HAD family hydrolase n=1 Tax=Microbacterium paraoxydans RepID=UPI00036F2425 rbh
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:KJL40052.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengis
hydrolase of the HAD superfamily
SCNpilot_solid_1_scaffold_1217_12
unknown

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comp(10660..11547)
DNA (888bp) protein (296aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1217_trna_1
unknown

Not on your lists

comp(11694..11767)
DNA (74bp)
transferRNA
SCNpilot_solid_1_scaffold_1217_13
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11948..14308)
DNA (2361bp) protein (787aa)
Membrane carboxypeptidase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N803_MICTS
Penicillin-binding protein 2D {ECO:0000313|EMBL:KJL40054.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
membrane carboxypeptidase
SCNpilot_solid_1_scaffold_1217_14
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14384..15313)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037424B3 rbh
Metallophosphatase {ECO:0000313|EMBL:KHK96427.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
phosphohydrolase
SCNpilot_solid_1_scaffold_1217_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15313..17958)
DNA (2646bp) protein (882aa)
Membrane carboxypeptidase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N803_MICTS rbh
Penicillin-binding protein 2D {ECO:0000313|EMBL:KJL40054.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
membrane carboxypeptidase
SCNpilot_solid_1_scaffold_1217_16
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18063..18278
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000360C3B3
Uncharacterized protein {ECO:0000313|EMBL:GAD35403.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCNpilot_solid_1_scaffold_1217_17
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18280..18741
DNA (462bp) protein (154aa)
LysR family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI000375FAF4
Endoribonuclease L-PSP {ECO:0000313|EMBL:KJL40056.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
translation initiation inhibitor, yjgF family
SCNpilot_solid_1_scaffold_1217_18
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(18825..20792)
DNA (1968bp) protein (656aa)
acetyl-CoA synthetase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037CFC52
acyl-coenzyme A synthetase/AMP-(fatty) acid ligase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_solid_1_scaffold_1217_19
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21147..22160
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI000375309E rbh
Pilus assembly protein CpaF {ECO:0000313|EMBL:KHK95345.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
Flp pilus assembly protein, ATPase CpaF
SCNpilot_solid_1_scaffold_1217_20
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22425..22898
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036ADF68
Bacterial type II secretion system protein F domain protein {ECO:0000313|EMBL:KJL28663.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Mi
Flp pilus assembly protein TadB
SCNpilot_solid_1_scaffold_1217_21
unknown

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22956..23078
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1217_22
unknown

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23597..24436
DNA (840bp) protein (280aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1217_23
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24465..25025
DNA (561bp) protein (187aa)
Uncharacterized protein {ECO:0000313|EMBL:AJW78481.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidios
SCNpilot_solid_1_scaffold_1217_24
unknown

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25460..25948
DNA (489bp) protein (163aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1217_25
unknown

Not on your lists

25952..26095
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1217_26
unknown

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26209..26496
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1217_27
unknown

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26496..26816
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1217_28
unknown

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26809..27093
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1217_29
unknown

Not on your lists

27356..27508
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

View Taxonomy