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SCNpilot_solid_1_scaffold_1731

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1731_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3..425
DNA (423bp) protein (141aa)
tRNA synthetase class II (D K and N) n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3W5_9MICO
tRNA synthetase class II (D K and N) {ECO:0000313|EMBL:EIC08452.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevanif
aspS; aspartyl/asparaginyl-tRNA synthetase
SCNpilot_solid_1_scaffold_1731_2
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(504..800)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003470D1E
Stress responsive A/B Barrel Domain protein {ECO:0000313|EMBL:KJL21209.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxy
hypothetical protein
SCNpilot_solid_1_scaffold_1731_3
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(797..1069)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D42376
Thiol-disulfide isomerase and thioredoxins {ECO:0000313|EMBL:CDK01439.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp
thiol-disulfide isomerase and thioredoxins
SCNpilot_solid_1_scaffold_1731_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1119..1412)
DNA (294bp) protein (98aa)
sulfurtransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A9F19
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rhodanese-related sulfurtransferase
SCNpilot_solid_1_scaffold_1731_5
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(1693..1884)
DNA (192bp) protein (64aa)
excisionase n=1 Tax=Microbacterium yannicii RepID=UPI0002E488FB
excisionase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_solid_1_scaffold_1731_6
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2140..3255
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002D8D9A3 rbh
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:ACZ23161.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 /
SCNpilot_solid_1_scaffold_1731_7
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3134..4318)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CMI9_CLAM3
Glycosyltransferase {ECO:0000313|EMBL:AJW77926.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;
hypothetical protein
SCNpilot_solid_1_scaffold_1731_8
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4348..4491)
DNA (144bp) protein (48aa)
transcriptional regulator n=1 Tax=Microbacterium yannicii RepID=UPI0002E87856
Regulatory protein ArsR {ECO:0000313|EMBL:EIC08441.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.
SCNpilot_solid_1_scaffold_1731_9
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4705..6159
DNA (1455bp) protein (485aa)
Trk-type K+ transport systems, membranecomponents n=1 Tax=Microbacterium sp. TS-1 RepID=U2X8T2_9MICO rbh
Trk-type K+ transport systems, membranecomponents {ECO:0000313|EMBL:GAD33781.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacte
trkH; Trk-type K+ transport systems, membrane components
SCNpilot_solid_1_scaffold_1731_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6152..6823
DNA (672bp) protein (224aa)
K+ transport systems, NAD-binding component n=1 Tax=Microbacterium sp. TS-1 RepID=U2XLE0_9MICO rbh
Potassium transporter {ECO:0000313|EMBL:KIC56574.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
trkA; K+ transport systems, NAD-binding component
SCNpilot_solid_1_scaffold_1731_11
unknown

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comp(6727..6927)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1731_12
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7114..7938)
DNA (825bp) protein (275aa)
pyrroline-5-carboxylate reductase n=1 Tax=Microbacterium yannicii RepID=UPI0002F29469 rbh
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925}
proC; pyrroline-5-carboxylate reductase
SCNpilot_solid_1_scaffold_1731_13
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8005..9117
DNA (1113bp) protein (371aa)
Haloacetate dehalogenase H-1 {ECO:0000313|EMBL:KJL36125.1}; EC=3.8.1.3 {ECO:0000313|EMBL:KJL36125.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.
alpha/beta hydrolase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000363DF3D rbh
hydrolase or acyltransferase
SCNpilot_solid_1_scaffold_1731_14
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9300..10265
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031B85D7 rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:KHK95630.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacteri
cation transporter
SCNpilot_solid_1_scaffold_1731_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10265..11191
DNA (927bp) protein (309aa)
Pyrimidine monooxygenase RutA {ECO:0000313|EMBL:KJL36123.1}; EC=1.14.99.46 {ECO:0000313|EMBL:KJL36123.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacter
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NG12_MICTS rbh
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase
SCNpilot_solid_1_scaffold_1731_16
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11333..11797)
DNA (465bp) protein (155aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L848_9MICO
cytosine/adenosine deaminase
SCNpilot_solid_1_scaffold_1731_17
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11836..12468
DNA (633bp) protein (211aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {
uracil phosphoribosyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003711A52 rbh
upp; uracil phosphoribosyltransferase
SCNpilot_solid_1_scaffold_1731_18
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12483..13481)
DNA (999bp) protein (333aa)
transporter n=1 Tax=Agromyces subbeticus RepID=UPI0003B44236 rbh
Magnesium transport protein CorA {ECO:0000313|EMBL:KJL27323.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
Magnesium transport protein CorA
SCNpilot_solid_1_scaffold_1731_19
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13722..14024)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035D127D
Uncharacterized protein {ECO:0000313|EMBL:KHK95634.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCNpilot_solid_1_scaffold_1731_20
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14079..17744)
DNA (3666bp) protein (1222aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036FE048 rbh
DNA helicase {ECO:0000313|EMBL:KHK95635.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
superfamily I DNA and RNA helicase and helicase subunits
SCNpilot_solid_1_scaffold_1731_21
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17843..19696
DNA (1854bp) protein (618aa)
NAD+ synthetase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000364D87B rbh
NAD synthetase {ECO:0000313|EMBL:GAD33788.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
nadE; NAD synthase
Displaying 21 items

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