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SCNpilot_solid_1_scaffold_1937

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1937_1
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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217..555
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000303B3A3
4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:KIC58506.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium homini
4-amino-4-deoxy-L-arabinose transferase
SCNpilot_solid_1_scaffold_1937_2
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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552..1940
DNA (1389bp) protein (463aa)
FAD-binding protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036E3B82 rbh
FAD/FMN-containing dehydrogenase
FAD/FMN-containing dehydrogenase {ECO:0000313|EMBL:BAJ73649.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (st
SCNpilot_solid_1_scaffold_1937_3
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1937..2377
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KQM6_9MICO
NUDIX hydrolase {ECO:0000313|EMBL:KDA06444.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
DNA mismatch repair protein MutT
SCNpilot_solid_1_scaffold_1937_4
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2608..3387)
DNA (780bp) protein (260aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomera
multidrug transporter n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003758F82 rbh
N-acetylglucosamine-6-phosphate isomerase
SCNpilot_solid_1_scaffold_1937_5
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3380..4318)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036F92A8 rbh
Sugar kinase {ECO:0000313|EMBL:KIC58510.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Sugar kinase, ROK family
SCNpilot_solid_1_scaffold_1937_6
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4362..5258)
DNA (897bp) protein (299aa)
sugar ABC transporter permease n=1 Tax=Agromyces subbeticus RepID=UPI0003B60F40 rbh
Contig_72, whole genome shotgun sequence {ECO:0000313|EMBL:KIU02299.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
dasC; multiple sugar transport system permease
SCNpilot_solid_1_scaffold_1937_7
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5255..6244)
DNA (990bp) protein (330aa)
ABC transporter permease n=1 Tax=Agromyces subbeticus RepID=UPI0003B6F2B5 rbh
ABC transporter permease {ECO:0000313|EMBL:KHK98602.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
dasB; Maltose transport system permease protein malF rbh
SCNpilot_solid_1_scaffold_1937_8
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6297..7463)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037D2F2F rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHK98601.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium man
yurO-like ABC transporter extracellular-binding protein
SCNpilot_solid_1_scaffold_1937_9
unknown

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comp(7518..7631)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1937_10
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7710..8897)
DNA (1188bp) protein (396aa)
ROK family transcriptional regulator n=1 Tax=Microbacterium yannicii RepID=UPI0002EA14F0 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD86314.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
ROK family protein
SCNpilot_solid_1_scaffold_1937_11
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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9082..10506
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000372E16B rbh
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_solid_1_scaffold_1937_12
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10571..12790)
DNA (2220bp) protein (740aa)
isocitrate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035FADEA
Monomeric isocitrate dehydrogenase {ECO:0000313|EMBL:BAJ73651.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (
monomeric isocitrate dehydrogenase
SCNpilot_solid_1_scaffold_1937_13
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12889..13398
DNA (510bp) protein (170aa)
acetyltransferase n=1 Tax=Microbacterium yannicii RepID=UPI0002E0B99F
Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:KJL26973.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadir
speG; histone acetyltransferase HPA2
SCNpilot_solid_1_scaffold_1937_14
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13761..14009)
DNA (249bp) protein (83aa)
ABC transporter n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036CCBA7
ABC transporter {ECO:0000313|EMBL:KHL00064.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
multidrug ABC transporter ATPase/permease
Displaying 14 items

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