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SCNpilot_solid_1_scaffold_6347

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_6347_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..207)
DNA (207bp) protein (69aa)
Regulatory protein TetR n=2 Tax=Microbacterium RepID=H8E495_9MICO
Regulatory protein TetR {ECO:0000313|EMBL:EIC08144.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.
transcriptional regulator
SCNpilot_solid_1_scaffold_6347_2
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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325..1863
DNA (1539bp) protein (513aa)
MFS transporter n=1 Tax=Microbacterium yannicii RepID=UPI00031A54F8 rbh
Permease of the major facilitator superfamily {ECO:0000313|EMBL:GAD33131.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium
permease of the major facilitator superfamily
SCNpilot_solid_1_scaffold_6347_3
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1874..2926
DNA (1053bp) protein (351aa)
3-isopropylmalate dehydrogenase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XIU1_9MICO rbh
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:GAD33130.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
leuB; isocitrate/isopropylmalate dehydrogenase
SCNpilot_solid_1_scaffold_6347_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2988..4079
DNA (1092bp) protein (364aa)
Branched-chain amino acid aminotransferase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACF3_9MICO
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EIC08147.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium la
ilvE; branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
SCNpilot_solid_1_scaffold_6347_5
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4105..4872
DNA (768bp) protein (256aa)
Fumarylacetoacetate (FAA) hydrolase n=2 Tax=Microbacterium RepID=H8E499_9MICO rbh
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KHK97429.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
SCNpilot_solid_1_scaffold_6347_6
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5080..6060
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035DA4DB
MFS transporter {ECO:0000313|EMBL:KHK97566.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
permease of the major facilitator superfamily
SCNpilot_solid_1_scaffold_6347_7
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6073..7587
DNA (1515bp) protein (505aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1348253 species="Bacteria; A
Glutamate--tRNA ligase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACF8_9MICO rbh
gltX; glutamyl- and glutaminyl-tRNA synthetase
SCNpilot_solid_1_scaffold_6347_trna_1
unknown

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7658..7729
DNA (72bp)
transferRNA
SCNpilot_solid_1_scaffold_6347_8
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7888..8586
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AAM1_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL27502.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
SCNpilot_solid_1_scaffold_6347_9
unknown

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comp(8588..8806)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_6347_10
unknown

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comp(8815..9360)
DNA (546bp) protein (182aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_6347_11

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9783..10409
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002F7FE7E
Uncharacterized protein {ECO:0000313|EMBL:AIF14058.1}; TaxID=1456226 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_65_H02.;"
hypothetical protein
SCNpilot_solid_1_scaffold_6347_12
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10419..10694
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037597FC
Uncharacterized protein {ECO:0000313|EMBL:EYT61496.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
SCNpilot_solid_1_scaffold_6347_13
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10701..10856)
DNA (156bp) protein (52aa)
4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:KHK97472.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangr
Displaying 14 items

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