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SCNpilot_solid_1_scaffold_872_8

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 6457..7200

Top 3 Functional Annotations

Value Algorithm Source
VanR n=1 Tax=Corynebacterium equii RepID=V5KW95_COREQ similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 225.0
  • Bit_score: 401
  • Evalue 4.70e-109
  • rbh
VanR {ECO:0000313|EMBL:AHA41505.1}; TaxID=43767 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus hoagii (Corynebacterium equii).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 225.0
  • Bit_score: 401
  • Evalue 6.60e-109
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 223.0
  • Bit_score: 400
  • Evalue 3.80e-109

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Taxonomy

Rhodococcus equi → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGCGCGTGTTGGTGGTCGAGGATGAGCTGTACATGGCAGAGGCCATCCGCGACGGACTGCGCCTGGAGGCCATCGCCGCCGACATCGCCGGTGACGGCGACACCGCGCTTGAGCTGCTCGGCATCAATGCCTACGACATCGCCGTGCTCGACCGCGACATCCCGGGCCCGAGCGGCGACGAGGTGGCCGCCCGGATCGTGGACTCCGGCAGCGGCATCCCCATTCTCATGCTCACCGCGGCCGACCGGATCGACGACAAGGAGACCGGCTTCGAGCTCGGCGCCGACGACTACCTCACGAAACCGTTCGCACTGCGCGAGCTGGTGCTGCGGCTGCGCGCCCTCGACCGGCGACGCGTGCACAGCCGGCCGCCCGTCCAGGAGATCGCGGGCCTGCGCCTGGATCCGTTTCGCCGCGAGGTGTATCGCGATGGCCGGTACATCGCCCTGACCCGCAAGCAGTTCGCCGTGCTCGAGGTGCTGATGACAGCCGCCGGCGGCGTCATCAGCGCCGAGGAGCTGCTCGAGCGCGCCTGGGACGAGAACGCCGACCCGTTCACGAACGCGGTGCGCATCACGGTCTCGGCGCTGCGCAAACGCCTCGGCGAGCCCTGGCTCATCGCCACCGTGCCCGGCGTGGGATATCGCATCGACACCGGACCGGATGCCGCGGGGCAGGATGCCGCCCCACAGGATGCCGCCCCACAGGATGCCGCCGCGCAGGAGCTGGGCCGCCATGCGTAG
PROTEIN sequence
Length: 248
MRVLVVEDELYMAEAIRDGLRLEAIAADIAGDGDTALELLGINAYDIAVLDRDIPGPSGDEVAARIVDSGSGIPILMLTAADRIDDKETGFELGADDYLTKPFALRELVLRLRALDRRRVHSRPPVQEIAGLRLDPFRREVYRDGRYIALTRKQFAVLEVLMTAAGGVISAEELLERAWDENADPFTNAVRITVSALRKRLGEPWLIATVPGVGYRIDTGPDAAGQDAAPQDAAPQDAAAQELGRHA*