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SCNpilot_solid_1_scaffold_872

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_872_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..136)
DNA (135bp) protein (45aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XMZ3_9MICO
purA; adenylosuccinate synthase
SCNpilot_solid_1_scaffold_872_2
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

390..1142
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Gordonia araii NBRC 100433 RepID=G7GY60_9ACTO
Membrane protein {ECO:0000313|EMBL:KDA05190.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
SCNpilot_solid_1_scaffold_872_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1218..2648
DNA (1431bp) protein (477aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009500}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
argininosuccinate synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F2C6F rbh
argG; argininosuccinate synthase
SCNpilot_solid_1_scaffold_872_4
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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2912..3511
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035FA59F
transcriptional regulator
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_solid_1_scaffold_872_5
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3508..4515
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XAB5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAD34501.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCNpilot_solid_1_scaffold_872_6
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4512..5618
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XNK2_9MICO rbh
Contig_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIP91109.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
hypothetical protein
SCNpilot_solid_1_scaffold_872_7
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5615..6358
DNA (744bp) protein (248aa)
membrane protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000289FB04 rbh
Contig_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIP91109.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
hypothetical protein
SCNpilot_solid_1_scaffold_872_8
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6457..7200
DNA (744bp) protein (248aa)
VanR n=1 Tax=Corynebacterium equii RepID=V5KW95_COREQ rbh
VanR {ECO:0000313|EMBL:AHA41505.1}; TaxID=43767 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus hoagii (Corynebacterium equii).;"
winged helix family two component transcriptional regulator
SCNpilot_solid_1_scaffold_872_9
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7193..8281
DNA (1089bp) protein (363aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" sourc
histidine kinase n=1 Tax=Actinopolymorpha alba RepID=UPI0003695017 rbh
histidine kinase
SCNpilot_solid_1_scaffold_872_10
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8284..8892)
DNA (609bp) protein (203aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4
vanX; D-alanyl-D-alanine dipeptidase (EC:3.4.13.22)
peptidase M15 n=1 Tax=Actinopolymorpha alba RepID=UPI00036A3DE1 rbh
SCNpilot_solid_1_scaffold_872_11
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8889..9920)
DNA (1032bp) protein (344aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
Putative D-alanine-D-lactate ligase (EC:6.3.2.-)
D-alanine--D-alanine ligase n=1 Tax=Agromyces subbeticus RepID=UPI0003B527C4 rbh
SCNpilot_solid_1_scaffold_872_12
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9886..11163)
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNY243 RepID=UPI00036E7AE0 rbh
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit
Uncharacterized protein {ECO:0000313|EMBL:EPD66796.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
SCNpilot_solid_1_scaffold_872_13
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11409..13994
DNA (2586bp) protein (862aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002ECA53E rbh
Penicillin amidase {ECO:0000313|EMBL:KHK96092.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
penicillin amidase family protein
SCNpilot_solid_1_scaffold_872_14
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14088..14579)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FV03_ISOV2
Putative uncharacterized protein {ECO:0000313|EMBL:AEG44343.1}; Flags: Precursor;; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isopter
hypothetical protein
SCNpilot_solid_1_scaffold_872_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14952..15764
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037DB536
Uncharacterized protein {ECO:0000313|EMBL:KJL35986.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
16S rRNA uridine-516 pseudouridylate synthase
SCNpilot_solid_1_scaffold_872_16
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15854..16336)
DNA (483bp) protein (161aa)
cation:proton antiporter n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F7ADA
Monovalent cation/proton antiporter, MnhG/PhaG subunit {ECO:0000313|EMBL:EIC06404.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Micro
multisubunit Na+/H+ antiporter, MnhG subunit
SCNpilot_solid_1_scaffold_872_17
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16336..16599)
DNA (264bp) protein (88aa)
sodium:proton antiporter n=1 Tax=Microbacterium yannicii RepID=UPI0002E6BE1B
Multisubunit Na+/H+ antiporter, MnhF subunit {ECO:0000313|EMBL:CDK01101.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium
multisubunit Na+/H+ antiporter, MnhF subunit
SCNpilot_solid_1_scaffold_872_18
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16596..17135)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035DF6BC
Multisubunit Na+/H+ antiporter MrpE subunit {ECO:0000313|EMBL:GAD34514.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium s
multisubunit Na+/H+ antiporter, MnhE subunit
SCNpilot_solid_1_scaffold_872_19
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17132..18700)
DNA (1569bp) protein (523aa)
cation:proton antiporter n=1 Tax=Microbacterium yannicii RepID=UPI0002DDA626 rbh
Multisubunit Na+/H+ antiporter MrpD subunit {ECO:0000313|EMBL:GAD34515.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium s
formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
SCNpilot_solid_1_scaffold_872_20
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18697..19317)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000374270E
Sodium:proton antiporter {ECO:0000313|EMBL:EXJ52117.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
multisubunit Na+/H+ antiporter, MnhC subunit
SCNpilot_solid_1_scaffold_872_21
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19314..22271)
DNA (2958bp) protein (986aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00037044A1 rbh
Na(+)/H(+) antiporter subunit A {ECO:0000313|EMBL:KJL35979.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;
NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
SCNpilot_solid_1_scaffold_872_22
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22448..24592)
DNA (2145bp) protein (715aa)
Uncharacterized protein {ECO:0000313|EMBL:KJQ53255.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Putative uncharacterized protein id=4414161 bin=GWF2_Lentisphaerae_52_8 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
putative pectin lyase
SCNpilot_solid_1_scaffold_872_23
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24638..25465)
DNA (828bp) protein (276aa)
sugar ABC transporter permease n=1 Tax=Catelliglobosispora koreensis RepID=UPI000365C8F2 rbh
L-arabinose transport system permease protein AraQ {ECO:0000313|EMBL:KJQ53256.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbact
ABC transporter permease rbh
SCNpilot_solid_1_scaffold_872_24
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25465..26421)
DNA (957bp) protein (319aa)
Sugar-ABC transporter transmembrane protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FBV9_VERMA rbh
Lactose transport system permease protein LacF {ECO:0000313|EMBL:KJQ53257.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacteriu
sugar ABC transporter permease rbh
SCNpilot_solid_1_scaffold_872_25
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26426..27688)
DNA (1263bp) protein (421aa)
Extracellular solute-binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RGY0_9ACTO rbh
Multiple sugar-binding protein {ECO:0000313|EMBL:KJQ53258.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
sugar-binding lipoprotein rbh
SCNpilot_solid_1_scaffold_872_26
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27895..28731)
DNA (837bp) protein (279aa)
Transcriptional regulator n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBV3_MICTS
Pyruvate dehydrogenase complex repressor {ECO:0000313|EMBL:KJQ53261.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
transcriptional regulator
SCNpilot_solid_1_scaffold_872_27
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28759..29913
DNA (1155bp) protein (385aa)
Mandelate racemase {ECO:0000313|EMBL:KJQ53262.1}; EC=5.1.2.2 {ECO:0000313|EMBL:KJQ53262.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036CDD3C rbh
racemase
SCNpilot_solid_1_scaffold_872_28
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29913..30299
DNA (387bp) protein (129aa)
Hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:KJQ53263.1}; EC=3.1.2.6 {ECO:0000313|EMBL:KJQ53263.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacte
hypothetical protein n=1 Tax=actinobacterium SCGC AAA027-M14 RepID=UPI000381260B
hypothetical protein
Displaying 28 items

View Taxonomy