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SCNpilot_solid_1_scaffold_1742_13

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 10141..10821

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003483FE0 similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 227.0
  • Bit_score: 381
  • Evalue 4.60e-103
Contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92214.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 227.0
  • Bit_score: 383
  • Evalue 2.90e-103
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 227.0
  • Bit_score: 368
  • Evalue 1.90e-99

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Taxonomy

Microbacterium sp. MEJ108Y → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGACCCGGGTACTGATCGTGGAGGACGAGCCCGACCTCGCCGACCCGCTCGCCTATCTGCTGCGACGTGAGGGCTTCGATGTGGTCGTGGCCGAGGACGGCCCGGCCGCGCTCGCCGAGTACGCCGCGCACGGCGCCGACATCGTGCTGCTGGATCTCATGCTGCCTGGGATGGCGGGGACCGAGGTGTGCCGGCAGATCCGCACCACCAGCGCGGTGCCGATCATCATGGTCACCGCCAAGGACATCGAGGTGGACATCGTCGTCGGGCTCGAGCTGGGCGCGGACGACTACATCACGAAGCCGTACTCCAGCCGGGAGCTGCTCGCACGCATGCGCGCGGTGCTGCGCCGCTCGGCGGCGGACGTCGACCTCGACGAGCACGTGCTGGATGGTGGACGGGTGCGTCTGGATGTCGACCGCCACATCGTCACCGTCGACGGCGAGCAGATCAACATGCCGTTGAAGGAGTTCGAGCTGCTCGAGGTGCTGATGCGCAACGCCGGTCGCGTGCTGACCCGTGGGCAGCTCATCGATCGGGTGTGGGGCAGCGACTACTTCGGCGACACCAAGACGCTGGACGTGCATGTCAAGCGCATCCGGTCGCGCATCGAGGAGGATCCTCGCGACCCCGTGATGCTGGTGACAGTGCGCGGACTGGGATACCGCTTCGAGAGCTGA
PROTEIN sequence
Length: 227
MTRVLIVEDEPDLADPLAYLLRREGFDVVVAEDGPAALAEYAAHGADIVLLDLMLPGMAGTEVCRQIRTTSAVPIIMVTAKDIEVDIVVGLELGADDYITKPYSSRELLARMRAVLRRSAADVDLDEHVLDGGRVRLDVDRHIVTVDGEQINMPLKEFELLEVLMRNAGRVLTRGQLIDRVWGSDYFGDTKTLDVHVKRIRSRIEEDPRDPVMLVTVRGLGYRFES*