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SCNpilot_solid_1_scaffold_1742

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1742_1
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..159)
DNA (159bp) protein (53aa)
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
SCNpilot_solid_1_scaffold_1742_2
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(282..1220)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEH3_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD85080.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
NTP pyrophosphohydrolase including oxidative damage repair enzyme
SCNpilot_solid_1_scaffold_1742_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1217..3385)
DNA (2169bp) protein (723aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
polyphosphate kinase n=1 Tax=Microbacterium yannicii RepID=UPI0002F85EAB rbh
ppk; polyphosphate kinase
SCNpilot_solid_1_scaffold_1742_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3416..4108)
DNA (693bp) protein (231aa)
transcriptional regulator n=1 Tax=Microbacterium yannicii RepID=UPI00037C5DE4 rbh
Phosphate regulon transcriptional regulatory protein PhoB {ECO:0000313|EMBL:KJL38280.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Mic
glnR; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
SCNpilot_solid_1_scaffold_1742_5
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4150..4485
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E0718E
hypothetical protein
Predicted membrane protein {ECO:0000313|EMBL:BAJ75686.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain S
SCNpilot_solid_1_scaffold_1742_6
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4506..4619
DNA (114bp) protein (38aa)
Membrane protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDE0_9MICO
Contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92207.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
SCNpilot_solid_1_scaffold_1742_7
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4628..5227
DNA (600bp) protein (200aa)
UPF0678 fatty acid-binding protein-like protein MTES_2723 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N8N1_MICTS
hypothetical protein
UPF0678 fatty acid-binding protein-like protein MTES_2723 {ECO:0000256|HAMAP-Rule:MF_01297}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
SCNpilot_solid_1_scaffold_1742_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5227..6330
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003760727 rbh
aminomethyltransferase
Predicted aminomethyltransferase {ECO:0000313|EMBL:BAJ75688.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (st
SCNpilot_solid_1_scaffold_1742_9
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6493..7326)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036B6481 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD35319.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCNpilot_solid_1_scaffold_1742_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7367..8113
DNA (747bp) protein (249aa)
phosphoglyceromutase n=1 Tax=Microbacterium RepID=UPI0003698E04 rbh
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};;
gpmA; phosphoglycerate mutase 1
SCNpilot_solid_1_scaffold_1742_11
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8115..8771)
DNA (657bp) protein (219aa)
PhoU family transcriptional regulator n=1 Tax=Microbacterium yannicii RepID=UPI0002E350B1 rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
phoU; phosphate uptake regulator
SCNpilot_solid_1_scaffold_1742_12
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8915..10144
DNA (1230bp) protein (410aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" sour
histidine kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI000346D2FC
signal transduction histidine kinase
SCNpilot_solid_1_scaffold_1742_13
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10141..10821
DNA (681bp) protein (227aa)
XRE family transcriptional regulator n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003483FE0
Contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92214.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
SCNpilot_solid_1_scaffold_1742_14
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10829..11335)
DNA (507bp) protein (169aa)
DNA modification methylase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N8N9_MICTS
DNA modification methylase
DNA modification methylase {ECO:0000313|EMBL:BAJ75695.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain S
SCNpilot_solid_1_scaffold_1742_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11592..12074
DNA (483bp) protein (161aa)
CarD family transcriptional regulator n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B331BE rbh
RNA polymerase-binding transcription factor CarD {ECO:0000313|EMBL:KJL38268.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacteri
transcriptional regulator, CarD-like regulator
SCNpilot_solid_1_scaffold_1742_16
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12077..12559
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F43674
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" sou
ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
SCNpilot_solid_1_scaffold_1742_17
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12857..14254
DNA (1398bp) protein (466aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
Cysteine--tRNA ligase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ASI6_9MICO rbh
cysS; cysteinyl-tRNA synthetase
SCNpilot_solid_1_scaffold_1742_18
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14247..15182
DNA (936bp) protein (312aa)
RNA methyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036A7948
RNA methyltransferase {ECO:0000313|EMBL:KHK98636.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
rRNA methylase
Displaying 18 items

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