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SCNpilot_solid_1_scaffold_1742_15

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 11592..12074

Top 3 Functional Annotations

Value Algorithm Source
CarD family transcriptional regulator n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B331BE similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 160.0
  • Bit_score: 301
  • Evalue 5.60e-79
  • rbh
RNA polymerase-binding transcription factor CarD {ECO:0000313|EMBL:KJL38268.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 160.0
  • Bit_score: 302
  • Evalue 3.50e-79
transcriptional regulator, CarD-like regulator similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 160.0
  • Bit_score: 295
  • Evalue 1.10e-77

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGCTTTTTGAGGTTGGCGAGACGGTCGTTTATCCGCACCACGGGGCGGCGACGATCGCGGAAGTGAAGACCCGAGTCATCAAGGGCGAAGAGAAGGTCTATCTGAAGCTCCGCGTCACCCAAGGCGATCTGACCATCGAGGTTCCGGCCGACAACGTCGACCTTGTCGGCGTCCGCGACGTCATCGGCAAGGAGGGCCTCGAGAAGGTCTTCGAGGTGTTGCGCGCTCCGTTCACGGAGGAGCCCACGAACTGGTCCCGCCGGTACAAGGCGAACCTCGAGAAGCTCGCCTCGGGCGATGTGATCAAGGTGAGCGAGGTCGTGCGCGACCTGTGGCGTCGTGACCAGGACCGCGGCCTGTCCGCAGGCGAGAAGCGGATGCTGGCCAAGGCCCGGCAGATCCTCGTTTCCGAGCTCGCGCTCGCGGAGAAGACCGACGAGGAGAAGGCCAGCGGTCTGCTCGACGAGGTGCTCGCCTCCTGA
PROTEIN sequence
Length: 161
MLFEVGETVVYPHHGAATIAEVKTRVIKGEEKVYLKLRVTQGDLTIEVPADNVDLVGVRDVIGKEGLEKVFEVLRAPFTEEPTNWSRRYKANLEKLASGDVIKVSEVVRDLWRRDQDRGLSAGEKRMLAKARQILVSELALAEKTDEEKASGLLDEVLAS*