ggKbase home page

SCNpilot_solid_1_scaffold_1883_12

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(11150..12265)

Top 3 Functional Annotations

Value Algorithm Source
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphat similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 361.0
  • Bit_score: 430
  • Evalue 2.60e-117
fni; Isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2) similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 361.0
  • Bit_score: 419
  • Evalue 1.20e-114
  • rbh
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Microbacterium sp. TS-1 RepID=U2X5W2_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 361.0
  • Bit_score: 430
  • Evalue 1.80e-117
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. TS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1116
ATGAGCAGCCAGCGGAAGGACCAGCACGTCGACCTCGCCGACGCTCAGCAGCGGGATCGCCCGGCACGCAACGACTTCGACGACGTGCGCCTCGTGCACCACGCGCTAGCCGGCATCGACCGGGATCGCGTCCGGCTGGACACGTCGTTCGCCGGCGTGTCGTGGCCCGCGCCGCTGTATGTCAACGGGATGACCGGCGGCAGCGCGCGCACGGGCGAGATCAACCGGTCGCTGGCGGTGGCCGCCCGGGAGACCGGCATCCCGATCGCCACGGGATCGATGAGCGTGGCCCTGCGCGACCCGGAGATGATCGGCACGTTCCAGGTCATGCGCGACGAGAACCCCGAGGGATTCGTGATGGCCAATCTCAGCGCCGACGCGACTGTCGACGACGCGGCGCGCGTCGTCGACCTGTTGCGAGCCGACGCGCTGCAGATCCACCTGAACAGCGTGCAGGAGACCGTGATGCCCGAGGGCAGCCGCGACTTCTCGGCATGGCCGGGCAACATCGCGGCGATCGTCGAGCGGGCCGGGGTACCGGTGATCGTCAAGGAGGTCGGCTTCGGTCTGAGTCGCCCGACCCTCGAGCGTCTCGCGGGTCTGGGCGTGCGGATCGCCGACGTGAGCGGATCCGGCGGCACCGACTTCGCACGCATCGAGAACTCCCGGCGAGCCGAGAGCGACTACGCCTTCATGGCGGGGTGGGGGCAGTCGGCGGTGTGCTGTCTGCTCGACGCGGCTGACACGTCGCCCCCTGCGTGCCGAGACGATGCGCTGGCGGCGATCCCCGCGCTGGTGGCCTCCGGCGGGGTGCGCACCCCGCTGGACGTCGTGCGCGCGCTCGCGCTGGGCGCCCACGCGGTCGGGGTGTCCGGGGTGTTCCTGCACGCCGTGCTGCGCGGGGGCGCCGAGGCCCTCATCGCGCAGATCCGCGCCTGGCTCGAGCAGATCGCGCAGCTGCACGCGCTGGTCGGGGCATCCGACCCCGCGCAGCTGGCCCGCACCGACCTGCTGCTGCGCGGCGACGTGCGGGAGTTCTGCGAGCTTCGCGGCATCGACGCCGCCGCATACAGCCGGCGCAGCGAGCGCCCGACGAGGAGTGCAGATGAGGGATGA
PROTEIN sequence
Length: 372
MSSQRKDQHVDLADAQQRDRPARNDFDDVRLVHHALAGIDRDRVRLDTSFAGVSWPAPLYVNGMTGGSARTGEINRSLAVAARETGIPIATGSMSVALRDPEMIGTFQVMRDENPEGFVMANLSADATVDDAARVVDLLRADALQIHLNSVQETVMPEGSRDFSAWPGNIAAIVERAGVPVIVKEVGFGLSRPTLERLAGLGVRIADVSGSGGTDFARIENSRRAESDYAFMAGWGQSAVCCLLDAADTSPPACRDDALAAIPALVASGGVRTPLDVVRALALGAHAVGVSGVFLHAVLRGGAEALIAQIRAWLEQIAQLHALVGASDPAQLARTDLLLRGDVREFCELRGIDAAAYSRRSERPTRSADEG*