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SCNpilot_solid_1_scaffold_1883

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1883_1
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..117
DNA (117bp) protein (39aa)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
malate synthase n=1 Tax=Microbacterium barkeri RepID=UPI0002F2FD0A
SCNpilot_solid_1_scaffold_1883_2
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(205..1116)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035C0C59
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE45182.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC
SCNpilot_solid_1_scaffold_1883_3
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1288..3000)
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AB41_9MICO rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KDA07096.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_solid_1_scaffold_1883_4
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3077..4327
DNA (1251bp) protein (417aa)
Aspartate aminotransferase {ECO:0000313|EMBL:KJL23270.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KJL23270.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;"
aspartate aminotransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037489E3 rbh
aspC; aspartate/tyrosine/aromatic aminotransferase
SCNpilot_solid_1_scaffold_1883_5
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4694..5830)
DNA (1137bp) protein (379aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylmuramate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367DACB rbh
UDP-N-acetylmuramate dehydrogenase
SCNpilot_solid_1_scaffold_1883_6
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5832..6236)
DNA (405bp) protein (135aa)
Acyl dehydratase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XL49_9MICO
Acyl dehydratase {ECO:0000313|EMBL:GAD33712.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
acyl dehydratase
SCNpilot_solid_1_scaffold_1883_7
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6233..6673)
DNA (441bp) protein (147aa)
UPF0336 protein MTS1_01064 n=1 Tax=Microbacterium sp. TS-1 RepID=U2YSM7_9MICO
UPF0336 protein MTS1_01064 {ECO:0000256|HAMAP-Rule:MF_00799}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
SCNpilot_solid_1_scaffold_1883_8
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6769..7554)
DNA (786bp) protein (262aa)
permease n=1 Tax=Microbacterium yannicii RepID=UPI0002F86F01 rbh
Sulfite exporter TauE/SafE {ECO:0000313|EMBL:KJQ54084.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
permease
SCNpilot_solid_1_scaffold_1883_9
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7567..8814)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00036D3CCC rbh
Cell envelope-related function transcriptional attenuator, LytR/CpsA family {ECO:0000313|EMBL:EZP28278.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacter
transcriptional regulator
SCNpilot_solid_1_scaffold_1883_10

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comp(8945..10114)
DNA (1170bp) protein (390aa)
mvaS; hydroxymethylglutaryl-CoA synthase (EC:2.3.3.10)
Wt8.23c n=1 Tax=uncultured bacterium WT8 RepID=U3Q0S3_9BACT rbh
Wt8.23c {ECO:0000313|EMBL:AGW83483.1}; TaxID=1393214 species="Bacteria; environmental samples.;" source="uncultured bacterium WT8.;"
SCNpilot_solid_1_scaffold_1883_11

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comp(10111..11160)
DNA (1050bp) protein (350aa)
Wt4.3c n=1 Tax=uncultured bacterium WT4 RepID=U3Q613_9BACT rbh
Wt4.3c {ECO:0000313|EMBL:AGW83457.1}; TaxID=1393213 species="Bacteria; environmental samples.;" source="uncultured bacterium WT4.;"
3-hydroxy-3-methylglutaryl-CoA reductase rbh
SCNpilot_solid_1_scaffold_1883_12
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(11150..12265)
DNA (1116bp) protein (372aa)
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphat
fni; Isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2) rbh
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Microbacterium sp. TS-1 RepID=U2X5W2_9MICO rbh
SCNpilot_solid_1_scaffold_1883_13
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(12293..13381)
DNA (1089bp) protein (363aa)
mvaK2; Phosphomevalonate kinase (EC:2.7.4.2) rbh
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI00035DBC35 rbh
Phosphomevalonate kinase {ECO:0000313|EMBL:EYT66926.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-A
SCNpilot_solid_1_scaffold_1883_14
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(13378..14292)
DNA (915bp) protein (305aa)
mvaD; diphosphomevalonate decarboxylase (EC:4.1.1.33)
diphosphomevalonate decarboxylase n=1 Tax=Ruania albidiflava RepID=UPI0003B636C0 rbh
Mevalonate pyrophosphate decarboxylase {ECO:0000313|EMBL:GAD32858.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS
Displaying 14 items

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