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SCNpilot_solid_1_scaffold_1888_7

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(6183..6968)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NBR0_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 246.0
  • Bit_score: 332
  • Evalue 2.80e-88
  • rbh
ssuC; binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 257.0
  • Bit_score: 326
  • Evalue 5.70e-87
  • rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AIJ23909.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsi similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 257.0
  • Bit_score: 326
  • Evalue 2.80e-86

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGCTGCGAGGCGAAAGACTGCAGAAGATCGCGAAGTGGGGGGCCACCCCCGCGATACTGATCGTCGTCTTCGCGGTGTGGGAGGCAGCCGTACGGGCCTTCCAGGTCAACCCGTTGATCCTCCCGGCGCCGAGCGAGATCTTCGTGCGGCTCGTCCAGCTCCTGCAGGGGCCGACGATCTGGCAGGACGCCCAGACCACGACGACCGAAGCCGTCGTGGGGTTCCTGATCGCCGTCGTCGTGGGAGTGATCGCGGGTGTCATCCTCGGGAAGTCCCAGCTGCTGGAGATCAGTATGCGGCCGCTCGTGGTCGGCTCGCAGGTGGTCCCCAAGGTCGCGCTGATCCCGCTGTTCGTCATCTGGTTCGGATTCGGCATCAGCTCGAAGATCATCATCGCCGCGCTCATGGGGTTCTTCCCGATCATGCTCAACGTGCAGCTGGGCGTGCGATCGGTCGACCCCGGCCAGCGGGACGTCATGCGGAGCCTGAACGCATCCCGGTGGCAGACGTTCCGCCACCTGGAACTGAAGAGCACCCTCCCGTACGTGTTCGCGGGGATGGAGGTCGGCATCGTCTTCTCGTTGATCGGCGCGATCGTCGGCGAGTATCTCGGCGGCAGTGTGGGGCTGGGCTACGAGCTCGTGCAGACCCTGAACAACCTGGATGCCTCCGGACTGTTCGCCGTGATCCTGCTGCTTTCCGCCTTGGGCCTCATCCTCTACTTCCTCGTCACCGTCGCGAAAAGGGTGTCGATCCCGTGGCATGAGTCGGCGACCGTTCAATGA
PROTEIN sequence
Length: 262
MLRGERLQKIAKWGATPAILIVVFAVWEAAVRAFQVNPLILPAPSEIFVRLVQLLQGPTIWQDAQTTTTEAVVGFLIAVVVGVIAGVILGKSQLLEISMRPLVVGSQVVPKVALIPLFVIWFGFGISSKIIIAALMGFFPIMLNVQLGVRSVDPGQRDVMRSLNASRWQTFRHLELKSTLPYVFAGMEVGIVFSLIGAIVGEYLGGSVGLGYELVQTLNNLDASGLFAVILLLSALGLILYFLVTVAKRVSIPWHESATVQ*