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SCNpilot_solid_1_scaffold_1888

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1888_1
unknown

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1..72
DNA (72bp) protein (24aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1888_2
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(69..503)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037C8BE1
Uncharacterized protein {ECO:0000313|EMBL:CDK00057.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
putative aconitase subunit 2
SCNpilot_solid_1_scaffold_1888_3
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(500..1786)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Streptomyces rapamycinicus RepID=UPI00038309B6 rbh
Uncharacterized protein {ECO:0000313|EMBL:EXU62787.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
hypothetical protein rbh
SCNpilot_solid_1_scaffold_1888_4
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1891..2715)
DNA (825bp) protein (275aa)
Transcriptional regulator n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X1N7_9PSEU
Transcriptional regulator {ECO:0000313|EMBL:CDK00132.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
IclR family transcriptional regulator
SCNpilot_solid_1_scaffold_1888_5
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2766..4454)
DNA (1689bp) protein (563aa)
acetolactate synthase (EC:2.2.1.6)
acetolactate synthase n=1 Tax=Citricoccus sp. CH26A RepID=UPI000255F670 rbh
Acetolactate synthase I/II/III large subunit {ECO:0000313|EMBL:CDK00240.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium
SCNpilot_solid_1_scaffold_1888_6
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4549..6186)
DNA (1638bp) protein (546aa)
Long-chain-fatty-acid--CoA ligase FadD19 {ECO:0000313|EMBL:KJL36096.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KJL36096.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Mic
AMP-dependent synthetase and ligase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UH06_CELFN
AMP-dependent synthetase and ligase
SCNpilot_solid_1_scaffold_1888_7
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6183..6968)
DNA (786bp) protein (262aa)
ABC transporter permease n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NBR0_9ACTO rbh
ssuC; binding-protein-dependent transport systems inner membrane component rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AIJ23909.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsi
SCNpilot_solid_1_scaffold_1888_8
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6971..7747)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MSP9_9ACTO rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:EHR50898.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharo
ssuB; ABC transporter ATP-binding protein rbh
SCNpilot_solid_1_scaffold_1888_9
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7884..8960)
DNA (1077bp) protein (359aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X1N6_9PSEU
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:EHR50899.1}; Flags: Precursor;; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseu
hypothetical protein
SCNpilot_solid_1_scaffold_1888_10
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(9232..9975)
DNA (744bp) protein (248aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8I9_SPHTD
Haloacid dehalogenase domain-containing protein hydrolase
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:ACZ40132.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae;
SCNpilot_solid_1_scaffold_1888_11
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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10128..11705
DNA (1578bp) protein (526aa)
Enantioselective amidase n=1 Tax=Rhodococcus erythropolis RepID=Q8KRD8_RHOER rbh
Enantioselective amidase {ECO:0000313|EMBL:AAK11724.1}; TaxID=1833 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (Arthrobacter pic
amidase
SCNpilot_solid_1_scaffold_1888_12
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(11753..13114)
DNA (1362bp) protein (454aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1348253 species="Bacter
Phosphoglucosamine mutase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEC9_MICTS rbh
glmM; phosphomannomutase
SCNpilot_solid_1_scaffold_1888_13
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13123..13602)
DNA (480bp) protein (160aa)
30S ribosomal protein S9 n=1 Tax=Microbacterium barkeri RepID=UPI00030CA4AC
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="M
rpsI; 30S ribosomal protein S9
SCNpilot_solid_1_scaffold_1888_14
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(13629..14075)
DNA (447bp) protein (149aa)
50S ribosomal protein L13 n=1 Tax=Microbacterium sp. TS-1 RepID=U2XBG4_9MICO
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="
rplM; 50S ribosomal protein L13
Displaying 14 items

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