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SCNpilot_solid_1_scaffold_1888_14

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(13629..14075)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Microbacterium sp. TS-1 RepID=U2XBG4_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 148.0
  • Bit_score: 280
  • Evalue 7.20e-73
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 148.0
  • Bit_score: 284
  • Evalue 7.00e-74
rplM; 50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 148.0
  • Bit_score: 259
  • Evalue 8.30e-67

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 447
GTGACGCGCACTTTCACCCCCAAGGCTGGCGAGATCCAGCGCGAATGGCTGGTCATCGACGCCACTGACGTCGTGCTCGGCCGCCTGGCCTCGCACGCTGCCGCACTCCTGCGTGGCAAGCACAAGCCGACCTTCGCCAACCACCTGGACACGGGCGACTTCGTCGTCATCGTCAACGCGGACAAGGTCGCGCTGACCGGGCAGAAGCTCCAGAAGAAGATCGCCTACCGGCACTCCGGCTACCCGGGCGGCCTGAAGGCCGTCGCGTACGAGGAGCTGCTCGAGAAGAACCCGGTCCGTGCGGTGGAGAAGGCCGTGCGCGGCATGCTCCCCAAGAACAGTCTGGGCCGCCAGCAGCTGTCGAAGCTGAAGGTCTACGCCGGCGCCGAGCACCCGCACGCCGCGCAGCAGCCCAAGACGTACACCTTCGACCAGGTCGCCCAGTAA
PROTEIN sequence
Length: 149
VTRTFTPKAGEIQREWLVIDATDVVLGRLASHAAALLRGKHKPTFANHLDTGDFVVIVNADKVALTGQKLQKKIAYRHSGYPGGLKAVAYEELLEKNPVRAVEKAVRGMLPKNSLGRQQLSKLKVYAGAEHPHAAQQPKTYTFDQVAQ*