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SCNpilot_solid_1_scaffold_2956_5

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(2006..3088)

Top 3 Functional Annotations

Value Algorithm Source
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 345.0
  • Bit_score: 599
  • Evalue 3.10e-168
ribosome small subunit-dependent GTPase A n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003621DAE similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 348.0
  • Bit_score: 580
  • Evalue 1.10e-162
  • rbh
GTPase similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 351.0
  • Bit_score: 565
  • Evalue 1.00e-158

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ATGCCGCGGCCTAGCCGTGCCCGCACCATGAGCTGGCTCGACGACACCGACGACGACGAACCGGAGTTCGACGAGTCGGACGTGCGAGTGCGCCCGAACCCCAAGGCCAACCGTCCGCGCACCAAGCGCCGGCCCGCACATGCCGACGCGGTGCTCGCCCGGGTGCTCAGCGTGGATCGTGGCCGGTACACGGTGCTGGTGGGCGAGGACACCCCGGGCGAGCACGAGGCGACGGCGGCACGGGCTCGTGAGCTTCGCCGGCAGGCCATCGTCACGGGTGACCAGGCGCGCGTCGTCGGCGACACGTCCGGCCGCGAGGGCACGCTGGCGCGCATCGTGGGGCTCGCGCAGCGCACGACCTTGCTGCGCCGCAGTGCGGATGACACCGACCAGGTGGAGCGGGTCATCGTCGCGAACGCCGACCAGATGCTCATCGTGGTGGCCGCGGCCGACCCCGAGCCCCGCGCGCGGCTCGTGGACCGCTACCTCGTCGCGGCGCTGGATGCCGGCATCCGCCCGCTGCTGGTCGTGACCAAGACCGACCTCGCCGATCCCACGCCGTTCCTGCGGCACTTCGACGGGATCGACCTGCGCGTGTTCACGAGCGCGCGCGGTGCGATGCCGATCGACCGGATCGGCGCCGCCCTGGTCGGGCACTCCACCGTGTTCGTCGGCCATTCCGGGGTGGGCAAGTCGACGCTCGTCAACGCGCTGGTGCCCGACGCGGGCCGGGCCACCGGCCACGTGAACGAGGTGACCGGGAGGGGCAGGCATACCTCGAGCTCGACGGTGTCGTTGCGGTACCGCGCGGCGGAGGGCACCGGCTGGGTGATCGATACGCCCGGCGTACGCTCGTTCGGCCTGGGGCATGTCGATCCCGCGCACATTCTCGAGGCGTTCACCGACCTCGCCGAGGTCGCCCGGGACTGCCCGCGGGGCTGTACGCACCTGCCCGACGCACCCGACTGCGCGATCGCGGAGGCGGTGGGGTCGGGGCGGCTGGGACCGGCCGCCGCGGGGCGGCTGGACTCGCTGCAGCGCCTGCTCGCGACCTTCGCCGACGCGGCCGAGCGCGGGCGTTGA
PROTEIN sequence
Length: 361
MPRPSRARTMSWLDDTDDDEPEFDESDVRVRPNPKANRPRTKRRPAHADAVLARVLSVDRGRYTVLVGEDTPGEHEATAARARELRRQAIVTGDQARVVGDTSGREGTLARIVGLAQRTTLLRRSADDTDQVERVIVANADQMLIVVAAADPEPRARLVDRYLVAALDAGIRPLLVVTKTDLADPTPFLRHFDGIDLRVFTSARGAMPIDRIGAALVGHSTVFVGHSGVGKSTLVNALVPDAGRATGHVNEVTGRGRHTSSSTVSLRYRAAEGTGWVIDTPGVRSFGLGHVDPAHILEAFTDLAEVARDCPRGCTHLPDAPDCAIAEAVGSGRLGPAAAGRLDSLQRLLATFADAAERGR*