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SCNpilot_solid_1_scaffold_2956_7

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 4479..5129

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBL4_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 227.0
  • Bit_score: 348
  • Evalue 4.10e-93
  • rbh
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:KEP75693.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005. similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 228.0
  • Bit_score: 349
  • Evalue 3.40e-93
sigH; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 227.0
  • Bit_score: 348
  • Evalue 1.20e-93

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Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGATCGCCACTCTGGAACGCCCAGCCGTGGGGCAGGCGCCGCACGTAGACTTGCGGGCGATGGATGAGTCGCAGACCACAGTCGACGTGCGTGCGCAGTTCGAAGAGCAGGCGCTGCCGTACATGGACCAGCTCTATGCCGCCGCGATGCGCATGACGCGCAACCCCGCCGACGCGGCCGATCTCGTGCAGGAGACGTTCGTGAAGGCGTTCGGCTCCTGGCAGACCTTCCGGCAGGGCACGAACCTGAAGGCGTGGCTGTACCGGATCCTCACGAACACCTACATCAACACCTACCGTAAGAAGCAGCGCGAGCCGTACCAGAGCCCGATCGACGATCTCGAGGACTGGCAGCTGGGCGGCGCAGAGTCGACGACGTCGACCACGGCGCGCTCCGCGGAGGCGGAGGCGATCGACCGGATGCCGGCATCCGTCGTCAAAGAGGCGCTGCAGTCCATCCCGGAGGACTTCCGGATGGCGGTGTACCTCGCCGACGTCGAGGGCTTCGCCTACCAGGAGATCGCCGACATCATGAAGACCCCCATCGGCACGGTCATGAGCCGTCTGCATCGTGGCAGGCGAATGCTTCGTGAACTGCTCGCCGATTACGCCGCCGAGCGCGGCATCACTGCACCAGGGAGCACGAAATGA
PROTEIN sequence
Length: 217
MIATLERPAVGQAPHVDLRAMDESQTTVDVRAQFEEQALPYMDQLYAAAMRMTRNPADAADLVQETFVKAFGSWQTFRQGTNLKAWLYRILTNTYINTYRKKQREPYQSPIDDLEDWQLGGAESTTSTTARSAEAEAIDRMPASVVKEALQSIPEDFRMAVYLADVEGFAYQEIADIMKTPIGTVMSRLHRGRRMLRELLADYAAERGITAPGSTK*