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scnpilot_solids1_trim150_scaffold_2018

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2018_1
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1151)
DNA (1149bp) protein (383aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
UPI0003CFA271 related cluster n=1 Tax=unknown RepID=UPI0003CFA271
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:ESZ24839.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
scnpilot_solids1_trim150_scaffold_2018_2
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1148..2386)
DNA (1239bp) protein (413aa)
Rare lipoprotein A n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3C4_9RHIZ rbh
Rare lipoprotein A {ECO:0000313|EMBL:EHH13784.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
rare lipoprotein A; K03642 rare lipoprotein A rbh
scnpilot_solids1_trim150_scaffold_2018_trna_1
unknown

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2580..2666
DNA (87bp)
transferRNA Ser
scnpilot_solids1_trim150_scaffold_2018_3
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2741..3175)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Byssochlamys spectabilis (strain No. 5 / NBRC 109023) RepID=V5G466_BYSSN
Acetyltransferase domain protein {ECO:0000313|EMBL:AJZ61100.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
N-acetyltransferase GCN5
scnpilot_solids1_trim150_scaffold_2018_4
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3646..4302
DNA (657bp) protein (219aa)
Membrane protein n=3 Tax=Mesorhizobium RepID=V7EVJ1_9RHIZ
Membrane protein {ECO:0000313|EMBL:ESZ17296.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
integral membrane protein TerC
scnpilot_solids1_trim150_scaffold_2018_5
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4370..5437)
DNA (1068bp) protein (356aa)
UPI0003CE36E4 related cluster n=1 Tax=unknown RepID=UPI0003CE36E4
DNA-binding protein {ECO:0000313|EMBL:ESY64745.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
putative ABC-type transport system, periplasmic component/surface lipoprotein
scnpilot_solids1_trim150_scaffold_2018_6
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5489..6463)
DNA (975bp) protein (325aa)
UPI0003CDF61F related cluster n=1 Tax=unknown RepID=UPI0003CDF61F rbh
ABC transporter permease {ECO:0000313|EMBL:ESW91321.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
putative ABC-type transport system, permease component rbh
scnpilot_solids1_trim150_scaffold_2018_7
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6463..7560)
DNA (1098bp) protein (366aa)
UPI0003CFC6E8 related cluster n=1 Tax=unknown RepID=UPI0003CFC6E8
Sugar ABC transporter permease {ECO:0000313|EMBL:ESZ12462.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
scnpilot_solids1_trim150_scaffold_2018_8
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7557..9122)
DNA (1566bp) protein (522aa)
ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] rbh
ABC transporter related protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBU2_MESOW rbh
ABC transporter related protein {ECO:0000313|EMBL:AEH88916.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
scnpilot_solids1_trim150_scaffold_2018_9
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9269..10081)
DNA (813bp) protein (271aa)
Phosphatidylcholine synthase {ECO:0000256|PIRNR:PIRNR000851}; Short=PC synthase {ECO:0000256|PIRNR:PIRNR000851};; Short=PCS {ECO:0000256|PIRNR:PIRNR000851};; EC=2.7.8.24 {ECO:0000256|PIRNR:PIRNR000851};; CDP-diglyceride-choline O-phosphatidyltransferase {ECO:0000256|PIRNR:PIRNR000851}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Phosphatidylcholine synthase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FPB9_9RHIZ
phosphatidylserine synthase
scnpilot_solids1_trim150_scaffold_2018_10
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10352..11536
DNA (1185bp) protein (395aa)
Putative 2-octaprenyl-6-methoxyphenol 4-monoxygenase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F8R9_9RHIZ
Putative 2-octaprenyl-6-methoxyphenol 4-monoxygenase {ECO:0000313|EMBL:CCV13667.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family rbh
scnpilot_solids1_trim150_scaffold_2018_11
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11578..11928
DNA (351bp) protein (117aa)
Hemimethylated DNA binding domain protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KP66_MESAW
hemimethylated DNA binding domain protein
Hemimethylated DNA binding domain protein {ECO:0000313|EMBL:AGB46470.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids1_trim150_scaffold_2018_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11938..12303)
DNA (366bp) protein (122aa)
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
Aspartyl-tRNA synthetase / asparaginyl-tRNA synthetase (Aspartate-/asparagine-tRNA ligase) (AspRS) {ECO:0000313|EMBL:CDX24655.1}; EC=6.1.1.12 {ECO:0000313|EMBL:CDX24655.1};; EC=6.1.1.22 {ECO:0000313|EMBL:CDX24655.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
UPI0003CEFF39 related cluster n=1 Tax=unknown RepID=UPI0003CEFF39
Displaying 13 items

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