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scnpilot_solids1_trim150_scaffold_2027

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2027_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..120)
DNA (120bp) protein (40aa)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI00034626CE
Uncharacterized protein {ECO:0000313|EMBL:EKS31229.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
scnpilot_solids1_trim150_scaffold_2027_2
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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408..1382
DNA (975bp) protein (325aa)
cyclase n=1 Tax=Rhizobium loti RepID=UPI00037B5D0A rbh
Cyclase family protein {ECO:0000313|EMBL:AID28145.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
putative cyclase rbh
scnpilot_solids1_trim150_scaffold_2027_3
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1463..2371
DNA (909bp) protein (303aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A2K4_STAND rbh
NAD-dependent epimerase/dehydratase rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADH91534.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
scnpilot_solids1_trim150_scaffold_2027_4
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2372..3142
DNA (771bp) protein (257aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] rbh
Short-chain dehydrogenase/reductase SDR n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A2K3_STAND rbh
Uncharacterized protein {ECO:0000313|EMBL:KJB94399.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
scnpilot_solids1_trim150_scaffold_2027_5
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3147..4751
DNA (1605bp) protein (535aa)
60 kDa chaperonin n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46QP4_CUPPJ
60 kDa chaperonin {ECO:0000256|RuleBase:RU000419}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
chaperonin Cpn60/TCP-1; K04077 chaperonin GroEL
scnpilot_solids1_trim150_scaffold_2027_6
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4751..5959
DNA (1209bp) protein (403aa)
spermidine/putrescine ABC transporter ATP-binding subunit; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31]
Spermidine/putrescine ABC transporter ATP-binding subunit n=1 Tax=Mycobacterium sp. (strain Spyr1) RepID=E6TI94_MYCSR
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWY39565.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
scnpilot_solids1_trim150_scaffold_2027_7
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6035..7234
DNA (1200bp) protein (400aa)
Spermidine/putrescine-binding periplasmic protein n=1 Tax=Rhizobium sp. AP16 RepID=J2X129_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KJB92400.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
spermidine/putrescine ABC transporter
scnpilot_solids1_trim150_scaffold_2027_8
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7300..8211
DNA (912bp) protein (304aa)
Spermidine/putrescine ABC transporter n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JN72_AGRRK
Uncharacterized protein {ECO:0000313|EMBL:KHJ54895.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
spermidine/putrescine ABC transporter
scnpilot_solids1_trim150_scaffold_2027_9
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8232..9095
DNA (864bp) protein (288aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9A1_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:KJB92398.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
binding-protein-dependent transport systems inner membrane component; K02053 putative spermidine/putrescine transport system permease protein
scnpilot_solids1_trim150_scaffold_2027_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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9126..9818
DNA (693bp) protein (231aa)
nitrilase n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002378F41
Putative amidohydrolase {ECO:0000313|EMBL:EXG82506.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
amidohydrolase
Displaying 10 items

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