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scnpilot_solids1_trim150_scaffold_2105

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2105_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..130
DNA (129bp) protein (43aa)
Salicylyl-CoA 5-hydroxylase {ECO:0000313|EMBL:AJP71669.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
scnpilot_solids1_trim150_scaffold_2105_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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147..908
DNA (762bp) protein (254aa)
Putative beta-hydroxyacyl-CoA dehydrogenase n=1 Tax=Variovorax paradoxus B4 RepID=T1X8S3_VARPD
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AJP71670.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids1_trim150_scaffold_2105_3
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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905..1402
DNA (498bp) protein (166aa)
Transcriptional regulator, MarR family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V4I1_SPHWW
MarR family transcriptional regulator {ECO:0000313|EMBL:AJP71671.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
MarR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_2105_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1399..2208
DNA (810bp) protein (270aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:AJP71672.1}; EC=4.2.1.17 {ECO:0000313|EMBL:AJP71672.1};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
enoyl-CoA hydratase (EC:4.2.1.17) rbh
enoyl-CoA hydratase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AB63 rbh
scnpilot_solids1_trim150_scaffold_2105_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2208..3374
DNA (1167bp) protein (389aa)
abmD; acyl-CoA dehydrogenase (EC:1.3.99.-); K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
acyl-CoA dehydrogenase n=1 Tax=Cupriavidus sp. WS RepID=UPI00037D546B
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AJP71673.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
scnpilot_solids1_trim150_scaffold_2105_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3374..3778
DNA (405bp) protein (135aa)
thioesterase superfamily protein; K01075 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
Acyl-CoA thioester hydrolase, YbgC/YbaW family n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QS67_BREDI
Uncharacterized protein {ECO:0000313|EMBL:AJP71674.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
scnpilot_solids1_trim150_scaffold_2105_7
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3775..4179
DNA (405bp) protein (135aa)
Endoribonuclease L-PSP n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATR8_RUBXD
Endoribonuclease L-PSP {ECO:0000313|EMBL:AJP74347.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
endoribonuclease L-PSP
scnpilot_solids1_trim150_scaffold_2105_8
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4218..5543)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI0_GEMAT rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
scnpilot_solids1_trim150_scaffold_2105_9
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5951..6424
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6E420
transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
scnpilot_solids1_trim150_scaffold_2105_10
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6648..8051)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4PAM7_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:AHE54006.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
amidohydrolase
scnpilot_solids1_trim150_scaffold_2105_11
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8178..9563
DNA (1386bp) protein (462aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y2S1_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
Displaying 11 items

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