ggKbase home page

scnpilot_solids1_trim150_scaffold_2106

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2106_1
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64..1044
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IZP5_9SPHN rbh
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAM01315.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial rbh
scnpilot_solids1_trim150_scaffold_2106_2
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1014..1880
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IZP5_9SPHN
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:KHL26658.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
putative ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial rbh
scnpilot_solids1_trim150_scaffold_2106_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2161..5187
DNA (3027bp) protein (1009aa)
Tetratricopeptide repeat protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q8X7_BREDI rbh
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EKY24185.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
transglutaminase
scnpilot_solids1_trim150_scaffold_2106_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5161..6348)
DNA (1188bp) protein (396aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003607838 rbh
two-component system, sensor histidine kinase
scnpilot_solids1_trim150_scaffold_2106_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6338..7645)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036F3BC2 rbh
Sphingomonas taxi strain 30a NODE_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30225.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
two component sigma54 specific Fis family transcriptional regulator
scnpilot_solids1_trim150_scaffold_2106_6
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7748..9004
DNA (1257bp) protein (419aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Sphingomonas sp. S17 RepID=F3WW75_9SPHN rbh
Putative HlyD family secretion protein {ECO:0000313|EMBL:GAM02613.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein rbh
scnpilot_solids1_trim150_scaffold_2106_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9001..9681
DNA (681bp) protein (227aa)
phosphonate ABC transporter ATP-binding protein n=1 Tax=Sphingomonas melonis RepID=UPI00037A12C9 rbh
Sphingomonas taxi strain 30a NODE_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30249.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein rbh
scnpilot_solids1_trim150_scaffold_2106_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9699..10481
DNA (783bp) protein (261aa)
transporter n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225EA81
Sphingomonas taxi strain 30a NODE_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30227.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein; K02004 putative ABC transport system permease protein
Displaying 8 items

View Taxonomy