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scnpilot_solids1_trim150_scaffold_2116

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2116_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..150)
DNA (150bp) protein (50aa)
Hemimethylated DNA-binding region n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBV4_9SPHN
Hemimethylated DNA-binding region {ECO:0000313|EMBL:ENY81198.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hemimethylated DNA-binding region; K11940 heat shock protein HspQ
scnpilot_solids1_trim150_scaffold_2116_2
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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400..1665
DNA (1266bp) protein (422aa)
transposase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289BB3E rbh
Transposase {ECO:0000313|EMBL:AJA10033.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
transposase
scnpilot_solids1_trim150_scaffold_2116_3
unknown

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1759..2472
DNA (714bp) protein (238aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2116_4
unknown

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2649..2843
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2116_5
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2847..3056
DNA (210bp) protein (70aa)
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_2116_6
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3053..3373
DNA (321bp) protein (107aa)
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_2116_7
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3370..3933
DNA (564bp) protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:KFG90039.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
scnpilot_solids1_trim150_scaffold_2116_8
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3923..5479
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUP7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ36292.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_2116_9
unknown

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5482..5994
DNA (513bp) protein (171aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2116_10
unknown

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6116..6922
DNA (807bp) protein (269aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2116_11
unknown

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7069..7263
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2116_12
unknown

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7260..7520
DNA (261bp) protein (87aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2116_13
unknown

Not on your lists

7748..8230
DNA (483bp) protein (161aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2116_14
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8386..9330)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJF3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CCW15777.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
scnpilot_solids1_trim150_scaffold_2116_15
unknown

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comp(9616..9972)
DNA (357bp) protein (119aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2116_16
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9969..10652)
DNA (684bp) protein (228aa)
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_2116_17
unknown

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11105..11488
DNA (384bp) protein (128aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2116_18
unknown

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11704..12009
DNA (306bp) protein (102aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2116_19
unknown

Not on your lists

12021..12476
DNA (456bp) protein (152aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2116_20
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12496..13548
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003670E7E
Uncharacterized protein {ECO:0000313|EMBL:AHE52822.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
scnpilot_solids1_trim150_scaffold_2116_21
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13545..18233
DNA (4689bp) protein (1563aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036DC77D rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_2116_trna_1
unknown

Not on your lists

comp(18421..18507)
DNA (87bp)
transferRNA Ser
scnpilot_solids1_trim150_scaffold_2116_22
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18586..18849)
DNA (264bp) protein (88aa)
Amidohydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W173_9SPHN
Amidohydrolase {ECO:0000313|EMBL:ENY81197.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
amidohydrolase
Displaying 23 items

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