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scnpilot_solids1_trim150_scaffold_2152

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2152_1
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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45..275
DNA (231bp) protein (77aa)
Antitoxin Phd_YefM, type II toxin-antitoxin system {ECO:0000313|EMBL:GAM10163.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Putative uncharacterized protein id=4205429 bin=GWC2_CP_Nitrospirae-rel_42_7 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
scnpilot_solids1_trim150_scaffold_2152_2
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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446..664
DNA (219bp) protein (73aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
scnpilot_solids1_trim150_scaffold_2152_3
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(822..1748)
DNA (927bp) protein (309aa)
glyoxalase n=1 Tax=Patulibacter americanus RepID=UPI0003B5E505
Uncharacterized protein {ECO:0000313|EMBL:KKB77888.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
glyoxalase/bleomycin resistance protein/dioxygenase; K07104
scnpilot_solids1_trim150_scaffold_2152_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1898..2449
DNA (552bp) protein (184aa)
Polyisoprenoid-binding protein n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6KF02_STRNV
YceI family protein {ECO:0000313|EMBL:AHG91629.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2152_5
unknown

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comp(2552..3046)
DNA (495bp) protein (165aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2152_6
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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3345..3830
DNA (486bp) protein (162aa)
Plasmid pRiA4b ORF-3 family protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IY65_9GAMM
Plasmid pRiA4b ORF-3 family protein {ECO:0000313|EMBL:EGW19987.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
plasmid pRiA4b ORF-3 family protein
scnpilot_solids1_trim150_scaffold_2152_7
unknown

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comp(3856..4722)
DNA (867bp) protein (289aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2152_8
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4810..5592)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI0003812FFC
Uncharacterized protein {ECO:0000313|EMBL:KGD96316.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
transcriptional regulator, iclR family
scnpilot_solids1_trim150_scaffold_2152_9

Not on your lists

comp(5627..6751)
DNA (1125bp) protein (375aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
amidase n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B5B2A4
Uncharacterized protein {ECO:0000313|EMBL:KKN82842.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids1_trim150_scaffold_2152_10
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(6748..8694)
DNA (1947bp) protein (649aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4P9_SPHTD
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Tax=RBG_16_Armatimonadetes_67_12_curated
scnpilot_solids1_trim150_scaffold_2152_11
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(8696..9283)
DNA (588bp) protein (196aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A690_DEIPD
dipeptide/oligopeptide/nickel ABC transporter permease
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:AFZ69403.1}; Flags: Precursor;; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
scnpilot_solids1_trim150_scaffold_2152_12
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(9524..10444)
DNA (921bp) protein (307aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A7H2_DEIPD rbh
dipeptide/oligopeptide/nickel ABC transporter permease rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:AFZ69404.1}; Flags: Precursor;; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
scnpilot_solids1_trim150_scaffold_2152_13
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(10506..12080)
DNA (1575bp) protein (525aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A8J6_DEIPD rbh
dipeptide ABC transporter substrate-binding protein rbh
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:AFZ69405.1}; Flags: Precursor;; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
scnpilot_solids1_trim150_scaffold_2152_14
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12077..13282)
DNA (1206bp) protein (402aa)
Amidohydrolase n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G6J4_9EURY
Imidazolonepropionase {ECO:0000313|EMBL:CQR53670.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
amidohydrolase
scnpilot_solids1_trim150_scaffold_2152_15
unknown

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comp(13558..13725)
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 15 items

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