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scnpilot_solids1_trim150_scaffold_2158

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2158_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..103
DNA (102bp) protein (34aa)
acyl-CoA dehydrogenase domain-containing protein; K00257 [EC:1.3.99.-]
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GE81_ALIDK
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAO27046.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_2158_2
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(154..1209)
DNA (1056bp) protein (352aa)
2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT id=2033351 bin=GWB2_Geobacter-like_52_12 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good rbh
sugar ABC transporter ATP-binding protein; K02023 multiple sugar transport system ATP-binding protein rbh
Tax=GWB2_Geobacteraceae_52_12_curated
scnpilot_solids1_trim150_scaffold_2158_3
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1206..2288)
DNA (1083bp) protein (361aa)
2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT id=2033352 bin=GWB2_Geobacter-like_52_12 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good rbh
sugar ABC transporter ATP-binding protein; K02023 multiple sugar transport system ATP-binding protein rbh
Tax=GWB2_Geobacteraceae_52_12_curated
scnpilot_solids1_trim150_scaffold_2158_4
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2300..3148)
DNA (849bp) protein (283aa)
ABC transporter permease protein id=2033353 bin=GWB2_Geobacter-like_52_12 species=Thalassiobium sp. R2A62 genus=Thalassobium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good rbh
ABC transporter permease rbh
Tax=GWB2_Geobacteraceae_52_12_curated
scnpilot_solids1_trim150_scaffold_2158_5
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3145..4026)
DNA (882bp) protein (294aa)
Binding-protein-dependent transport systems inner membrane component id=2033354 bin=GWB2_Geobacter-like_52_12 species=Thalassiobium sp. R2A62 genus=Thalassobium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good rbh
hypothetical protein rbh
Tax=GWB2_Geobacteraceae_52_12_curated
scnpilot_solids1_trim150_scaffold_2158_6
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4159..5757)
DNA (1599bp) protein (533aa)
ABC transporter solute-binding protein id=2033356 bin=GWB2_Geobacter-like_52_12 species=Thalassiobium sp. R2A62 genus=Thalassobium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
scnpilot_solids1_trim150_scaffold_2158_7
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5799..6851)
DNA (1053bp) protein (351aa)
alcohol dehydrogenase; K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] rbh
Blr3675 protein id=2033358 bin=GWB2_Geobacter-like_52_12 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good rbh
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
scnpilot_solids1_trim150_scaffold_2158_8
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7089..8969
DNA (1881bp) protein (627aa)
Putative sigma-54-dependent transcriptional regulator, HTH Fis-type family id=2033360 bin=GWB2_Geobacter-like_52_12 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good rbh
putative phytochrome sensor protein rbh
Tax=GWB2_Geobacteraceae_52_12_curated
scnpilot_solids1_trim150_scaffold_2158_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9061..9249)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037CFED5
Uncharacterized protein {ECO:0000313|EMBL:GAD21488.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_solids1_trim150_scaffold_2158_10
unknown

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9251..9325
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 10 items

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