ggKbase home page

scnpilot_solids1_trim150_scaffold_2188

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2188_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..1875)
DNA (1875bp) protein (625aa)
Copper-resistance protein, CopA family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIF6_RHOM4
CopA family copper-resistance protein
Copper-resistance protein, CopA family {ECO:0000313|EMBL:ACY48264.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
scnpilot_solids1_trim150_scaffold_2188_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2500..4068
DNA (1569bp) protein (523aa)
Copper resistance protein D n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A807_GEMAT
copper resistance protein D; K07245 putative copper resistance protein D
Copper resistance protein D {ECO:0000313|EMBL:BAH38367.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_2188_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4234..4959)
DNA (726bp) protein (242aa)
ccdA; cytochrome c-type biogenesis protein CcdA (EC:1.8.-.-); K06196 cytochrome c-type biogenesis protein
Cytochrome c-type biogenesis protein CcdA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W2_GEMAT
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:AHG90368.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_2188_4
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(4963..5532)
DNA (570bp) protein (190aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QNQ4_METTR
Disulfide bond oxidoreductase D family protein {ECO:0000313|EMBL:AIC15655.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
resA; thiol-disulfide oxidoreductase resA
scnpilot_solids1_trim150_scaffold_2188_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(5529..6767)
DNA (1239bp) protein (413aa)
hypothetical protein id=24463449 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Lewinella cohaerens genus=Lewinella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin rbh
hypothetical protein rbh
Tax=RBG_16_RIF_WS3X_71_46_curated
scnpilot_solids1_trim150_scaffold_2188_6
unknown

Not on your lists

7243..7458
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2188_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8059..8892)
DNA (834bp) protein (278aa)
Copper resistance B n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIF7_RHOM4
copper resistance B; K07233 copper resistance protein B
Copper resistance B {ECO:0000313|EMBL:ACY48265.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
scnpilot_solids1_trim150_scaffold_2188_8
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8879..9199)
DNA (321bp) protein (107aa)
Copper-resistance protein, CopA family n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HI99_ANADF
CopA family copper resistance protein
Copper-resistance protein, CopA family {ECO:0000313|EMBL:ABS28445.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
Displaying 8 items

View Taxonomy