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scnpilot_solids1_trim150_scaffold_2213

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2213_1
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1199)
DNA (1197bp) protein (399aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W010_9GAMM
scnpilot_solids1_trim150_scaffold_2213_2
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1339..1707
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AAZ1_RHIFH
Lactoylglutathione lyase-related lyase {ECO:0000313|EMBL:AIY39401.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2213_3
unknown

Not on your lists

1815..2300
DNA (486bp) protein (162aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2213_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2303..2980
DNA (678bp) protein (226aa)
Thiopurine S-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00812, ECO:0000256|SAAS:SAAS00017626}; EC=2.1.1.67 {ECO:0000256|HAMAP-Rule:MF_00812, ECO:0000256|SAAS:SAAS00017626};; Thiopurine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00812}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
thiopurine S-methyltransferase (EC:2.1.1.67); K00569 thiopurine S-methyltransferase [EC:2.1.1.67]
Thiopurine S-methyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7V3_9GAMM
scnpilot_solids1_trim150_scaffold_2213_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3012..4289)
DNA (1278bp) protein (426aa)
Major facilitator family transporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN19_9GAMM
arabinose efflux permease family protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2213_6
unknown

Not on your lists

comp(4324..4509)
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2213_7
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4596..4835)
DNA (240bp) protein (80aa)
aldo/keto reductase n=1 Tax=Cupriavidus sp. WS RepID=UPI000375AC6C
Aldo/keto reductase {ECO:0000313|EMBL:KGI77668.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
LysR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_2213_8
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4927..5586)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Solanum lycopersicum RepID=K4AQV0_SOLLC
Aldo/keto reductase {ECO:0000313|EMBL:KGI77668.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
probable aldo-keto reductase 2-like
scnpilot_solids1_trim150_scaffold_2213_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5631..6776)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F138B6
Aldo/keto reductase {ECO:0000313|EMBL:AHX13794.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
aldo/keto reductase
scnpilot_solids1_trim150_scaffold_2213_10
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6880..7779
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037EA1AD
LysR family transcriptional regulator {ECO:0000313|EMBL:KGI77669.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
aldo/keto reductase
scnpilot_solids1_trim150_scaffold_2213_11
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7960..8472
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D420D7
Uncharacterized protein {ECO:0000313|EMBL:AHX13793.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_solids1_trim150_scaffold_2213_12
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8524..9837)
DNA (1314bp) protein (438aa)
formimidoylglutamate deiminase (EC:3.5.3.13)
Formimidoylglutamate deiminase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIG5_9GAMM
N-formimino-L-glutamate deiminase {ECO:0000313|EMBL:KGI77671.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
scnpilot_solids1_trim150_scaffold_2213_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9928..11154
DNA (1227bp) protein (409aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPB8_9GAMM
scnpilot_solids1_trim150_scaffold_2213_14
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11213..11401)
DNA (189bp) protein (63aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN41573.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
scnpilot_solids1_trim150_scaffold_2213_15
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11503..12432)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DD85ED
Zinc transporter ZitB {ECO:0000313|EMBL:AIF48545.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
cation diffusion facilitator family transporter
scnpilot_solids1_trim150_scaffold_2213_16
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12632..13192)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D9C618
Uncharacterized protein {ECO:0000313|EMBL:AIF48546.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
MerC mercury resistance protein
scnpilot_solids1_trim150_scaffold_2213_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13247..13837)
DNA (591bp) protein (197aa)
TonB colicin receptor n=1 Tax=Dyella ginsengisoli RepID=UPI0003459114
Outer membrane receptor protein {ECO:0000313|EMBL:EIL96349.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2213_18
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13972..14637)
DNA (666bp) protein (222aa)
TonB colicin receptor n=1 Tax=Dyella japonica RepID=UPI0002F24D4F
TonB-dependent receptor {ECO:0000313|EMBL:AIF46701.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
Displaying 18 items

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