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scnpilot_solids1_trim150_scaffold_2223

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2223_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..319)
DNA (318bp) protein (106aa)
LacI family transcriptional regulator n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI000367E782
LacI family transcriptional regulator {ECO:0000313|EMBL:EPR23396.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
periplasmic binding protein/LacI transcriptional regulator; K02058 simple sugar transport system substrate-binding protein
scnpilot_solids1_trim150_scaffold_2223_2
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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499..1494
DNA (996bp) protein (332aa)
LacI family transcriptional regulator n=1 Tax=Rhizobium mongolense RepID=UPI0003B6B7CC rbh
LacI family transcription regulator; K02529 LacI family transcriptional regulator rbh
Probable transcriptional regulator protein, LacI family {ECO:0000313|EMBL:ABC91142.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
scnpilot_solids1_trim150_scaffold_2223_3
unknown

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2052..2441
DNA (390bp) protein (130aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2223_4
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2647..3594
DNA (948bp) protein (316aa)
ccoN; cytochrome-c oxidase (EC:1.9.3.1)
membrane protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B618BA
Membrane protein {ECO:0000313|EMBL:KJR63000.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
scnpilot_solids1_trim150_scaffold_2223_5
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3910..4242
DNA (333bp) protein (111aa)
putative cytochrome c oxidase subunit I (EC:1.9.3.1)
membrane protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B618BA
Membrane protein {ECO:0000313|EMBL:KJR63000.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
scnpilot_solids1_trim150_scaffold_2223_6
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4239..4859
DNA (621bp) protein (207aa)
cytochrome C oxidase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6D9B1
Cytochrome C oxidase {ECO:0000313|EMBL:KJR63001.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2223_7
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4856..6103
DNA (1248bp) protein (416aa)
cytochrome C n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B35F0E rbh
Uncharacterized protein {ECO:0000313|EMBL:KDP95706.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2223_8
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6100..7134
DNA (1035bp) protein (345aa)
cytochrome C n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B564B4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KDP95707.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_2223_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7140..9305
DNA (2166bp) protein (722aa)
Uncharacterized protein n=1 Tax=Spiribacter sp. UAH-SP71 RepID=U5T5U7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL29744.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_2223_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9333..10784)
DNA (1452bp) protein (484aa)
5'-nucleotidase domain protein (EC:3.1.3.5) rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PKL3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42121.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
scnpilot_solids1_trim150_scaffold_2223_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10868..11263)
DNA (396bp) protein (132aa)
Transcriptional regulator, ArsR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPP7_NITHX
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABE61800.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids1_trim150_scaffold_2223_12
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11260..11880)
DNA (621bp) protein (207aa)
alkyl hydroperoxide reductase (EC:1.11.1.7); K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] rbh
1-Cys peroxiredoxin {ECO:0000313|EMBL:ABA04155.1}; EC=1.11.1.15 {ECO:0000313|EMBL:ABA04155.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
1-Cys peroxiredoxin n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SU86_NITWN rbh
scnpilot_solids1_trim150_scaffold_2223_13
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12044..12907
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035E1356 rbh
Cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydD {ECO:0000313|EMBL:EJL57367.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
putative component of ABC transporter; K16013 ATP-binding cassette, subfamily C, bacterial CydD rbh
Displaying 13 items

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