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scnpilot_solids1_trim150_scaffold_2227

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2227_1
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(73..540)
DNA (468bp) protein (156aa)
transposase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B3DCCF
Mobile element protein {ECO:0000313|EMBL:AIL45240.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
integrase catalytic subunit
scnpilot_solids1_trim150_scaffold_2227_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(556..972)
DNA (417bp) protein (139aa)
Putative Transposase, ISSod13 n=1 Tax=Candidatus Nitrospira defluvii PF34_9BACT">RepID=D8PF34_9BACT
putative transposase, ISSod13
Putative Transposase, ISSod13 {ECO:0000313|EMBL:CBK41843.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
scnpilot_solids1_trim150_scaffold_2227_3
Dietzia sp. UCD-THP, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1076..1369)
DNA (294bp) protein (98aa)
transposase n=1 Tax=Dietzia sp. UCD-THP RepID=UPI00036C75B1
Transposase {ECO:0000313|EMBL:EYT54419.1}; TaxID=1292020 species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia sp. UCD-THP.;"
transposase
scnpilot_solids1_trim150_scaffold_2227_4
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1627..1920)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI0003607241
Transposase {ECO:0000313|EMBL:CDK00363.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
transposase
scnpilot_solids1_trim150_scaffold_2227_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2024..2293)
DNA (270bp) protein (90aa)
Type III restriction system methylase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXD7_TRURR
type III restriction system methylase
Tax=CG_Rhodof_04
scnpilot_solids1_trim150_scaffold_2227_6
unknown

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comp(2552..3757)
DNA (1206bp) protein (402aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2227_7
unknown

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4121..4945
DNA (825bp) protein (275aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2227_8
Halomonas sp. GFAJ-1, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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4942..5262
DNA (321bp) protein (107aa)
Integrase catalytic region n=2 Tax=Halomonas sp. GFAJ-1 RepID=H0J6M4_9GAMM
Integrase catalytic region {ECO:0000313|EMBL:EHK59417.1}; TaxID=1118153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. GFAJ-1.;"
integrase catalytic subunit
scnpilot_solids1_trim150_scaffold_2227_9
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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5535..8336
DNA (2802bp) protein (934aa)
hypothetical protein n=2 Tax=Aminicenantes RepID=UPI00035D8BCD rbh
Uncharacterized protein {ECO:0000313|EMBL:KJF18173.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
hypothetical protein rbh
Displaying 9 items

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