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scnpilot_solids1_trim150_scaffold_2245

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2245_1
unknown

Not on your lists

comp(2..73)
DNA (72bp) protein (24aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2245_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70..1848)
DNA (1779bp) protein (593aa)
Copper resistance transmembrane protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNY6_9GAMM rbh
Copper resistance transmembrane protein {ECO:0000313|EMBL:EIM01178.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
copper-resistance protein, CopA family
scnpilot_solids1_trim150_scaffold_2245_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2422..2763)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFP1_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2245_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3251..5212)
DNA (1962bp) protein (654aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNY5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM01177.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_2245_5
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5209..5652)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CHC3_ALCDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFT71031.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
scnpilot_solids1_trim150_scaffold_2245_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5649..6236)
DNA (588bp) protein (196aa)
Putative conjugal transfer TRAF transmembrane protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNY4_9GAMM rbh
Putative conjugal transfer TRAF transmembrane protein {ECO:0000313|EMBL:EIM01176.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
traF; plasmid conjugal transfer transmembrane protein
scnpilot_solids1_trim150_scaffold_2245_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6233..6754)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNY3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM01175.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2245_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6751..7002)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNY2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01174.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2245_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6999..7637)
DNA (639bp) protein (213aa)
Cobyrinic acid a,c-diamide synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNY1_9GAMM
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:EIM01173.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein
scnpilot_solids1_trim150_scaffold_2245_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7962..8687)
DNA (726bp) protein (242aa)
Replication initiator and transcription repressor protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNY0_9GAMM
Replication initiator and transcription repressor protein {ECO:0000313|EMBL:EIM01172.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
replication initiator and transcription repressor protein
scnpilot_solids1_trim150_scaffold_2245_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8714..9010)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNX9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01171.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2245_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9094..9858)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNX8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM01170.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2245_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10213..10560)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNX7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01169.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative lipoprotein
scnpilot_solids1_trim150_scaffold_2245_14
unknown

Not on your lists

comp(10566..10796)
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2245_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10939..11229
DNA (291bp) protein (97aa)
XRE family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNX6_9GAMM
XRE family transcriptional regulator {ECO:0000313|EMBL:EIM01168.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
XRE family transcriptional regulator
scnpilot_solids1_trim150_scaffold_2245_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11274..11588)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4ML18_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89908.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
y4eB-like protein
scnpilot_solids1_trim150_scaffold_2245_17
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11581..12150)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida (strain DOT-T1E) RepID=I7AVB3_PSEPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFO46565.1}; TaxID=1196325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain DOT-T1E).;"
scnpilot_solids1_trim150_scaffold_2245_18
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12411..13247)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003812FBC
Uncharacterized protein {ECO:0000313|EMBL:KEZ03610.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_2245_19
unknown

Not on your lists

14088..14525
DNA (438bp) protein (146aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2245_20
unknown

Not on your lists

comp(14631..15089)
DNA (459bp) protein (153aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2245_21
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15403..15636)
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM57482.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
scnpilot_solids1_trim150_scaffold_2245_22
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16245..16655
DNA (411bp) protein (137aa)
histidine biosynthesis protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034558E7
DNA-binding protein H-NS {ECO:0000313|EMBL:EIL90952.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
DNA-binding protein H-NS
scnpilot_solids1_trim150_scaffold_2245_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16672..16941)
DNA (270bp) protein (90aa)
DNA repair protein RadC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2J3_9GAMM
DNA repair protein RadC {ECO:0000313|EMBL:EIL93684.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA repair protein
Displaying 23 items

View Taxonomy