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scnpilot_solids1_trim150_scaffold_2253

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2253_1
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..224
DNA (222bp) protein (74aa)
hypothetical protein; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
Catalytic domain-containing protein of components of various dehydrogenase complexes n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVT2_PSEUU
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:KGI78918.1}; Flags: Fragment;; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
scnpilot_solids1_trim150_scaffold_2253_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(372..1727)
DNA (1356bp) protein (452aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYW1_9GAMM
scnpilot_solids1_trim150_scaffold_2253_3
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1770..2684)
DNA (915bp) protein (305aa)
arginase (EC:3.5.3.1)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
Arginase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMH4_9GAMM
scnpilot_solids1_trim150_scaffold_2253_4
unknown

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comp(2660..3349)
DNA (690bp) protein (230aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2253_5
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3512..4750
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002EA92A4
Porin {ECO:0000313|EMBL:AHX13934.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Carbohydrate-selective porin OprB
scnpilot_solids1_trim150_scaffold_2253_6
unknown

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comp(5181..5996)
DNA (816bp) protein (272aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2253_7
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5998..8985)
DNA (2988bp) protein (996aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037442EB
Uncharacterized protein {ECO:0000313|EMBL:KHS06610.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
Displaying 7 items

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