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scnpilot_solids1_trim150_scaffold_2258

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2258_1
unknown

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comp(1..294)
DNA (294bp) protein (98aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2258_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(291..1208)
DNA (918bp) protein (306aa)
thiosulfate sulfurtransferase (EC:2.8.1.1); K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] rbh
Thiosulfate sulfurtransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABH8_GEMAT rbh
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_2258_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1350..2630
DNA (1281bp) protein (427aa)
hypothetical protein id=24457733 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin rbh
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
scnpilot_solids1_trim150_scaffold_2258_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(2712..3638)
DNA (927bp) protein (309aa)
alpha/beta hydrolase id=14627016 bin=bin7_NC10_sister species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
alpha/beta hydrolase
Tax=CSP1_6_Rokubacteria
scnpilot_solids1_trim150_scaffold_2258_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3777..4430)
DNA (654bp) protein (218aa)
potassium transporter TrkA n=1 Tax=Schlesneria paludicola RepID=UPI000299D80E
TrkA-N domain-containing protein; K03499 trk system potassium uptake protein TrkA
TrkA-N domain protein {ECO:0000313|EMBL:AEN72086.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
scnpilot_solids1_trim150_scaffold_2258_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4462..5883)
DNA (1422bp) protein (474aa)
TrkH family potassium uptake protein (EC:3.6.3.14); K03498 trk system potassium uptake protein TrkH rbh
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:AEN72085.1}; EC=3.6.3.14 {ECO:0000313|EMBL:AEN72085.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
Potassium uptake protein, TrkH family n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE93_RHOMR rbh
scnpilot_solids1_trim150_scaffold_2258_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5884..6159)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABG0_GEMAT
HNH endonuclease {ECO:0000313|EMBL:AHG92017.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2258_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6162..6476
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABH3_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG92016.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2258_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6507..6968
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABG9_GEMAT
Amidohydrolase 3 {ECO:0000313|EMBL:AHG92015.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein; K07047
scnpilot_solids1_trim150_scaffold_2258_10
unknown

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7151..8185
DNA (1035bp) protein (345aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2258_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8309..8899
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI0003752EB9
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG88751.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids1_trim150_scaffold_2258_12
unknown

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8896..8961
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 12 items

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