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scnpilot_solids1_trim150_scaffold_2286

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2286_1
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..547)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000372338C
Amine oxidase {ECO:0000313|EMBL:KEC78244.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
amine oxidase protein
scnpilot_solids1_trim150_scaffold_2286_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(801..1781)
DNA (981bp) protein (327aa)
Helix-turn-helix, Fis-type n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXT7_9RHIZ rbh
Helix-turn-helix, Fis-type {ECO:0000313|EMBL:EYR79379.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Fis family transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_2286_3
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1778..2152)
DNA (375bp) protein (125aa)
Transposase IS3/IS911 family protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X7V3_OCHA4
transposase IS3/IS911 family protein; K07483 transposase
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ABS17307.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
scnpilot_solids1_trim150_scaffold_2286_4
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2200..2631)
DNA (432bp) protein (144aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhizobium sp. Pop5 RepID=K0VPD5_9RHIZ
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EJZ19460.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids1_trim150_scaffold_2286_5
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2737..3240
DNA (504bp) protein (168aa)
TetR family transcriptional regulator n=1 Tax=Rhizobium sp. Pop5 RepID=K0VKQ9_9RHIZ
TetR family transcriptional regulator {ECO:0000313|EMBL:EJZ19461.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
TetR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_2286_6
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3262..4170)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000363D2CE rbh
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:KEC77597.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
glycine cleavage system transcriptional activator GcvA rbh
scnpilot_solids1_trim150_scaffold_2286_7
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4345..5595)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036B664C rbh
MFS transporter {ECO:0000313|EMBL:KGM31129.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
Tetracycline resistance protein rbh
scnpilot_solids1_trim150_scaffold_2286_8
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5877..6662
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037C35C7 rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:KEC80376.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
AraC family transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_2286_9
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6683..7441)
DNA (759bp) protein (253aa)
Methyltransferase type 11 n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CUP9_SIDLE
methyltransferase type 11
Tax=RBG_16_Betaproteobacteria_56_24_curated
scnpilot_solids1_trim150_scaffold_2286_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7478..8140)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLQ9_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31242.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
ErfK/YbiS/YcfS/YnhG family protein
scnpilot_solids1_trim150_scaffold_2286_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8230..8865)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NYK8_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31243.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
redoxin
Displaying 11 items

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