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scnpilot_solids1_trim150_scaffold_2308

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2308_1
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..929)
DNA (927bp) protein (309aa)
Poly(3-hydroxyalkanoate) synthetase; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
Poly(3-hydroxyalkanoate) synthetase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W0U6_MAGSA
Polyhydroxyalkanoic acid synthase {ECO:0000313|EMBL:KIL97122.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
scnpilot_solids1_trim150_scaffold_2308_2
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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1104..2219
DNA (1116bp) protein (372aa)
Adenylate cyclase {ECO:0000313|EMBL:CDO61305.1}; EC=4.6.1.1 {ECO:0000313|EMBL:CDO61305.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
Putative uncharacterized protein n=1 Tax=Chlorella variabilis RepID=E1ZL43_CHLVA
uncharacterized LOC100252521
scnpilot_solids1_trim150_scaffold_2308_3
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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2303..3511
DNA (1209bp) protein (403aa)
Aspartate aminotransferase {ECO:0000313|EMBL:CDO61304.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDO61304.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
aminotransferase; K14261 alanine-synthesizing transaminase [EC:2.6.1.-] rbh
PREDICTED: aspartate aminotransferase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C157FE rbh
scnpilot_solids1_trim150_scaffold_2308_4
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3508..4794
DNA (1287bp) protein (429aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Homoserine dehydrogenase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AL91_AZOBR rbh
homoserine dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_2308_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4810..5772
DNA (963bp) protein (321aa)
glpX protein; K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] rbh
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00035EC530
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
scnpilot_solids1_trim150_scaffold_2308_6
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5765..7555
DNA (1791bp) protein (597aa)
Single-stranded-DNA-specific exonuclease n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TLZ1_TISMK
recJ; single-stranded-DNA-specific exonuclease
Single-stranded-DNA-specific exonuclease {ECO:0000313|EMBL:AFK53779.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
scnpilot_solids1_trim150_scaffold_2308_trna_1
unknown

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7733..7804
DNA (72bp)
transferRNA Glu
scnpilot_solids1_trim150_scaffold_2308_7
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7926..8798
DNA (873bp) protein (291aa)
ATP-dependent OLD family endonuclease n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4J7_9SPHN rbh
ATP-dependent OLD family endonuclease {ECO:0000313|EMBL:EGD60467.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hypothetical protein
Displaying 8 items

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