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scnpilot_solids1_trim150_scaffold_2315

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2315_1
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..385
DNA (384bp) protein (128aa)
DEAD/DEAH box helicase n=1 Tax=Pseudomonas aeruginosa VRFPA06 RepID=V8GEE5_PSEAI
Superfamily II DNA/RNA helicases, SNF2 family
Superfamily II DNA/RNA helicases, SNF2 family {ECO:0000313|EMBL:CDM23744.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
scnpilot_solids1_trim150_scaffold_2315_2
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(525..1247)
DNA (723bp) protein (241aa)
NADPH-dependent FMN reductase n=1 Tax=Pseudomonas aeruginosa VRFPA06 RepID=V8GM84_PSEAI rbh
NADPH-dependent FMN reductase {ECO:0000313|EMBL:KIL06452.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
arsenical resistance protein ArsH; K11811 arsenical resistance protein ArsH
scnpilot_solids1_trim150_scaffold_2315_3
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1240..1662)
DNA (423bp) protein (141aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029, ECO:0000313|EMBL:KIL06583.1}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
arsC3; arsenate reductase (EC:1.20.4.1); K00537 arsenate reductase [EC:1.20.4.1]
Arsenate reductase n=1 Tax=Pseudomonas aeruginosa WC55 RepID=T5L2E7_PSEAI
scnpilot_solids1_trim150_scaffold_2315_4
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1675..2760)
DNA (1086bp) protein (362aa)
Arr3 n=1 Tax=uncultured bacterium RepID=A9XR74_9BACT rbh
Arsenic transporter {ECO:0000313|EMBL:KIL06453.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
scnpilot_solids1_trim150_scaffold_2315_5
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2768..3265)
DNA (498bp) protein (166aa)
arsCa; arsenate reductase (EC:1.20.4.1); K03741 arsenate reductase [EC:1.20.4.1]
ArsC family transcriptional regulator n=1 Tax=Pseudomonas aeruginosa WC55 RepID=T5KZT8_PSEAI
Arsenate reductase {ECO:0000313|EMBL:EEE05482.1}; TaxID=513052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD2.;"
scnpilot_solids1_trim150_scaffold_2315_6
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3270..3593)
DNA (324bp) protein (108aa)
Putative transcriptional regulator n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IET9_BORPD
ArsR family transcriptional regulator {ECO:0000313|EMBL:KIL06455.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
arsR; transcriptional regulator
scnpilot_solids1_trim150_scaffold_2315_7
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3672..4139)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae subsp. pneumoniae KPX RepID=R4WC23_KLEPN
Tn3 family transposase
Transposase Tn3 family protein {ECO:0000313|EMBL:EED67470.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
scnpilot_solids1_trim150_scaffold_2315_8
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4136..4780)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82W58_NITEU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD84748.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
scnpilot_solids1_trim150_scaffold_2315_9
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4777..5013)
DNA (237bp) protein (79aa)
Mercury resistance protein MerE n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=A4F3B5_NITEU
Mercury resistance protein MerE {ECO:0000313|EMBL:CAM57836.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
putative mercury resistance protein
scnpilot_solids1_trim150_scaffold_2315_10
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5010..5375)
DNA (366bp) protein (122aa)
HTH-type transcriptional regulator merD n=2 Tax=Rhodocyclaceae RepID=F5RFN2_9RHOO
Transcriptional regulator {ECO:0000313|EMBL:EPZ14118.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
transcriptional regulator MerD
scnpilot_solids1_trim150_scaffold_2315_11

Not on your lists

comp(5393..7078)
DNA (1686bp) protein (562aa)
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
merA; mercuric reductase (EC:1.16.1.1); K00520 mercuric reductase [EC:1.16.1.1] rbh
Mercuric ion reductase n=2 Tax=Bacteria RepID=M3DUM0_STEMA rbh
scnpilot_solids1_trim150_scaffold_2315_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7117..7539)
DNA (423bp) protein (141aa)
MerC mercury resistance protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L023_HALNC
MerC mercury resistance protein
MerC mercury resistance protein {ECO:0000313|EMBL:ACX96046.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
scnpilot_solids1_trim150_scaffold_2315_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7566..7838)
DNA (273bp) protein (91aa)
Mercuric transport protein periplasmic component n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9Y4_ALIDK
mercuric transport protein periplasmic component; K08364 periplasmic mercuric ion binding protein
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids1_trim150_scaffold_2315_14
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7851..8201)
DNA (351bp) protein (117aa)
Mercuric ion transport protein n=2 Tax=root RepID=Q934S7_ACIFR
Mercuric ion transport protein; K08363 mercuric ion transport protein
Tax=CG_Rhodocyc_01
scnpilot_solids1_trim150_scaffold_2315_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8273..8680
DNA (408bp) protein (136aa)
Transcriptional regulator, MerR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9Y6_ALIDK
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AEB85718.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying 15 items

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