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scnpilot_solids1_trim150_scaffold_2318

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2318_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2..703
DNA (702bp) protein (234aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] id=12494087 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2]
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_2318_2
unknown

Not on your lists

981..1151
DNA (171bp) protein (57aa)
id=12494086 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
scnpilot_solids1_trim150_scaffold_2318_3
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1194..1619)
DNA (426bp) protein (142aa)
prepilin-type N-terminal cleavage/methylation domain-containing protein id=12494085 bin=THIO_HI species=Thiocystis violascens genus=Thiocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
prepilin-type N-terminal cleavage/methylation domain-containing protein
Tax=CG_Hydro_01
scnpilot_solids1_trim150_scaffold_2318_4
unknown

Not on your lists

comp(1637..1987)
DNA (351bp) protein (117aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2318_5
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1997..5437)
DNA (3441bp) protein (1147aa)
fimbrial assembly protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B6679F rbh
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; K02674 type IV pilus assembly protein PilY1 rbh
Tax=CG_Hydro_01
scnpilot_solids1_trim150_scaffold_2318_6
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5454..6017)
DNA (564bp) protein (188aa)
Tfp pilus assembly protein PilX id=12497896 bin=THIO_MID species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
type IV pilus assembly protein PilX; K02673 type IV pilus assembly protein PilX
Tax=CG_Hydro_01
scnpilot_solids1_trim150_scaffold_2318_7
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6021..7019)
DNA (999bp) protein (333aa)
Type IV pilus assembly protein PilW n=1 Tax=Thauera sp. 28 RepID=N6YG18_9RHOO rbh
hypothetical protein; K02672 type IV pilus assembly protein PilW
Tax=CG_Hydro_01
scnpilot_solids1_trim150_scaffold_2318_8
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7016..7462)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000370DFFE
type IV pilus modification protein PilV
Tax=CG_Hydro_01
scnpilot_solids1_trim150_scaffold_2318_9
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7471..7983)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367D6D2
type-4 fimbrial pilin related signal peptide protein; K08084 type IV fimbrial biogenesis protein FimT
Tax=CG_Hydro_01
scnpilot_solids1_trim150_scaffold_2318_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8159..8683)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003781618
prepilin-type N-terminal cleavage/methylation domain-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 10 items

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