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scnpilot_solids1_trim150_scaffold_2340

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2340_1
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..856
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRL3_SPHAL
Peptidase S74 {ECO:0000313|EMBL:KFG90721.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2340_2
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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853..1170
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RYF8_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48780.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
scnpilot_solids1_trim150_scaffold_2340_3
unknown

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1167..1454
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2340_4
unknown

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1472..1720
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2340_5
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1707..2291
DNA (585bp) protein (195aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
Lysozyme n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IM92_9SPHN
lysozyme
scnpilot_solids1_trim150_scaffold_2340_6
Sinorhizobium phage phiM19, T4likevirus, Caudovirales, Viruses

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comp(2230..2868)
DNA (639bp) protein (213aa)
HNH endonuclease n=1 Tax=Sinorhizobium phage phiM12 RepID=S5MQ23_9CAUD
HNH endonuclease {ECO:0000313|EMBL:AKF12769.1}; TaxID=1647403 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Sinorhizobium phage phiM7.;"
HNH endonuclease
scnpilot_solids1_trim150_scaffold_2340_7
unknown

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2979..3452
DNA (474bp) protein (158aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2340_8
unknown

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3410..3709
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2340_9
unknown

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3711..4094
DNA (384bp) protein (128aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2340_10
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4097..4888
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0G0S4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA97265.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
scnpilot_solids1_trim150_scaffold_2340_11
unknown

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comp(4983..5189)
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2340_12
unknown

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comp(5189..5449)
DNA (261bp) protein (87aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2340_13
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5520..6224)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0GB61_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA97262.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
scnpilot_solids1_trim150_scaffold_2340_14
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6570..6953)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Ralstonia solanacearum RepID=UPI00036A5559
Putative uncharacterized protein {ECO:0000313|EMBL:EHP91893.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
scnpilot_solids1_trim150_scaffold_2340_15
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6955..7779)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C057 rbh
gp37gp68 family protein
Tax=GWF1_Sphingomonadales_63_6_curated
scnpilot_solids1_trim150_scaffold_2340_16
unknown

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comp(7782..8051)
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2340_17
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8044..8583)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Acinetobacter sp. P8-3-8 RepID=UPI0002486C6D
Uncharacterized protein {ECO:0000313|EMBL:EXR08647.1}; TaxID=1310776 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter baumannii 1413735.;"
hypothetical protein
Displaying 17 items

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