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scnpilot_solids1_trim150_scaffold_2355

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2355_1
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..565
DNA (564bp) protein (188aa)
Membrane protein insertase YidC n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MTK3_9RHIZ
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
inner membrane protein translocase component YidC; K03217 preprotein translocase subunit YidC
scnpilot_solids1_trim150_scaffold_2355_2
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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576..1235
DNA (660bp) protein (220aa)
Probable GTP-binding protein EngB n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y5K3_9RHIZ rbh
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
ribosome biogenesis GTP-binding protein YsxC/EngB rbh
scnpilot_solids1_trim150_scaffold_2355_3
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1256..1759)
DNA (504bp) protein (168aa)
Methionine sulfoxide reductase B {ECO:0000313|EMBL:CDX37547.1}; EC=1.8.4.12 {ECO:0000313|EMBL:CDX37547.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
methionine-R-sulfoxide reductase (EC:1.8.4.12); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Methionine-R-sulfoxide reductase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TDL8_MESCW
scnpilot_solids1_trim150_scaffold_2355_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1850..3331)
DNA (1482bp) protein (494aa)
trimethylamine methyltransferase MttB; K14083 trimethylamine methyltransferase [EC:2.1.1.-]
Trimethylamine methyltransferase MttB n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3P2_9RHIZ
Trimethylamine methyltransferase MttB {ECO:0000313|EMBL:EHK52419.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids1_trim150_scaffold_2355_5
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3468..4961)
DNA (1494bp) protein (498aa)
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGH7_MESOW rbh
GntR family transcriptional regulator with aminotransferase domain {ECO:0000313|EMBL:CDX26238.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
GntR family transcriptional regulator; K00375 GntR family transcriptional regulator / MocR family aminotransferase rbh
scnpilot_solids1_trim150_scaffold_2355_6
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5204..6847
DNA (1644bp) protein (548aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
Glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9] rbh
UPI0003CEB731 related cluster n=1 Tax=unknown RepID=UPI0003CEB731 rbh
scnpilot_solids1_trim150_scaffold_2355_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6853..7563
DNA (711bp) protein (237aa)
HAD-superfamily hydrolase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I454_9RHIZ rbh
HAD-superfamily hydrolase {ECO:0000313|EMBL:EHK52240.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
haloacid dehalogenase superfamily enzyme, subfamily IA rbh
scnpilot_solids1_trim150_scaffold_2355_8
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7644..8288
DNA (645bp) protein (215aa)
Putative transcriptional regulator n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KUA2_MESAW rbh
DNA-binding protein {ECO:0000313|EMBL:EXL09172.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
putative transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_2355_9
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8305..8634
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y8V6_MESOW
hypothetical protein
Micrococcal nuclease-like nuclease {ECO:0000313|EMBL:AGB48259.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
Displaying 9 items

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