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scnpilot_solids1_trim150_scaffold_2468

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2468_1
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..726
DNA (726bp) protein (242aa)
Integrase catalytic subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W579_9SPHN
Integrase {ECO:0000313|EMBL:KKC28018.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
integrase catalytic subunit
scnpilot_solids1_trim150_scaffold_2468_2
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(988..3255)
DNA (2268bp) protein (756aa)
formate dehydrogenase alpha chain protein; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] rbh
CbbBc protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HH16_9SPHN rbh
CbbBc protein {ECO:0000313|EMBL:EQB11423.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
scnpilot_solids1_trim150_scaffold_2468_3
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3416..4222
DNA (807bp) protein (269aa)
Protein FdhD homolog n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GWR0_SPHAL rbh
formate dehydrogenase family accessory protein FdhD; K02379 FdhD protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_2468_4
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4244..5578)
DNA (1335bp) protein (445aa)
Putative two-component histidine kinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YNR0_9SPHN rbh
two component sensor histidine kinase rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_2468_5
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5581..6339)
DNA (759bp) protein (253aa)
Putative two-component response regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A659_9SPHN
transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_2468_6
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6450..8342
DNA (1893bp) protein (631aa)
Putative TonB-dependent receptor n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZXV7_9SPHN rbh
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Displaying 6 items

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